Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05810 ATGTTGAACAAGTTATACGTATGTGTATTAGAAGCCAAAGACTTACCCGTGAAGAATTCTCGTGTGAAGCTTAAACTTGGAAAGTTTAAATACAAGACAAGGATATTGAGAAACACGTTCAACCCTATTTGGAATGAAGAGTTTGTTTTTAAGGTGAAGGATATTGCTGAGGATGTGCTTGTTGTCAATGTTGTTAATCATAGTGATGAATCAAAGGTAGTGGATTTTGTGGGCGAGGTACGGATTCCGGTTAGTTCAGTTGATTTTGAGGATCATAGGCAAATATTGCCACCCACTTGGTTCGAGCTTCAATGTTCTAACAAGAGTGGAAAATTTTTCAACAAATTTTGTGGGAAGATTCTCCTTACAATTTCTCTTCATTATAAGGACCATGTTTCTTTTATGAATCATAAGCATTCTCCAAACTCAACTGCTTCAATTAAGGACTCAACAGAATCTGAACGTCTACACATTTCATCTCATCAATCTTTTCATAAAAATCGTAAAATGAGTGAAGGTAAACAGTTGTTGAAGGTTATCGCTAATCGCCTAGAAAGGATTTTCAACAAGAAGGAACGAAACTCAAAATCCGTGGATTGTTCAGAAACATCGAATTCATTGTCTGATTATGAAGATAGTGTTCAAGAAAATTCACCCTCTTGTAGTTTTGAAGAAGGCATTGCACTAATGGAGTCAAGAGATAACCAACCAGAAAGTCCTGAAAATTTGAAGGGTGGTATTTTAGTAGATAAGATTTATGAAGTATCTCCATACAATCTTAATGTAGTTCTTTTCGCGCCGGATTCACAGTTTAGGAAAGATTTAGCAGAACAACAAGGGACAACAAATTTGCAAGAAGGGGCTTGGTCCTGGAAAGATGACGATATGTCTTGTTTGACTCGAGTCGTCAACTATACAAAAGCTGCTTCGAAATTAGTTAAGGCTCTCAATACCACTGAGGAACAAACCTATATTAGAGTGGCTAAAGATGAATTTGATGTACTTGTTAGTGTATGCACCCCTGAGGTTCCTTATGGGAATTCATTTCGGGTCGAAATTCTTTACAAGATAATGCCTGGAGAAGATGTGTCTTGTGTAGAGGAATCTTCACATCTTGTGATATCATGGGGAATGGTTTTCCTACAAAGCACATTAATGAAAGGTGTGATAGAAAATGGGGCTAAACAAGGTTTGAAGGAGAGTTTTGACCAGTTTTCTAACCTACTTGCTCAGAGGTTTAAGGTGTTAGATAAGGAGGATTTGATAAACAAAGAACATTTGCTAGCAACTTTGCAGACAGAAAGCCAGTGGAATTGGTGGCAGGCAATTACATACTTCTGGAACTTCACAGTAGTTTCCACATTTTTTATGTGTTTATATGTGTTGCTGCATATTTTAAGGTGTGGTCCAAATCAACCTCGGGGATTGGAATTTAGAGGGATTGAGCTGCCAGATAGCTTAGGAGAACTAGTTACAAGTGGAATTTTAGTTATCCAGTTGGAGCGTGTTTATCATATGGTATCTCATTTTGTGCAAGCTAGATTTCAAATGGGAACCGACCATGGCATGAAAGCACATGGTGATGGATGGGTTGTAACTGTAGCTTTAATTGAGGGGGTGGACCTAGTCTCATTGGAGTCAACAGGGTTGTCAGATCCTTATGTGGTTTTCACCTGTAATGGACAAACAAGGTCAAGCTCTGTCAAGCTTGAGACATCAGATCCTCAATGGAATGAGATATTAGAGTTTGACGCTATGGAAGAACCACCATCAGTTTTGTATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTCCTAAAGCACACATCAACAGAATTGGCAGACATGTGGATCGTGCTTGAAGGAAAACTCGCCCAGTCTGCTCAATCGAAGTTACATTTGAGAATTTTCTTGGACAATAACAAAGGAGTTGAAATTATCAAGGATTACTTGGAGAAGAAGGAAAGGGAAGTAGGAAAAAAGTTCAATCTTCCATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCCTCCAGAAGAATTTCTAATCAATGATTTCACATGTTCCCTGAAGAGAAAATTGCATTTACAGGGTCGGCTATTTCTTTCTGCAAGGGTTCTGGGATTTTATGCAAATTTGTTTGGACATAAAACAAAATTTTTCTTCCTTTGGGAAGATATTGATAACATTCTAGTGCTTCCTCCATCATTAGCATCATTAGGAAGCCCTACATTGGCCATAATTCTTCGAAGAGGACGAGGTATCGATGCAAGGCACGGTGCCAAGACGCAAGATGAAGAAGGAAGGCTTAGGTTTCATTTTCAGTCATTTGTTTCATTCGGTTCTGCCTCCAGAACAATAATGGCATTGTGGAGAGCAAGAATGTTGAACCCCTATCAGAAAGAACAAACTACAGAAGAGCATGAAGATCAAGATGTCTTGGTAATGCCTGAAGACTCTGGATCTATCCTAGAAGATGAGGCAAAAATGTCCAGGATTTACTCTGCTGAACTACCAATTAAGATAGGATCAGTGATGGAAATTTTTTATGGAGGAAACATAGAGCATAAGATTATGAAAAGAACTGGTTGTATGGACTATGACACTACACCTTGGGAACCGGTAAAACCTGATGTACTCGAAAGGCATGTTACATACCAATTTAACCGGCATGTGTCAGTTTTTGATGTTACAAGCACACAACAAAAATATCCAAATACAAACACCGAAGGATGGATTGTGAATGAAGTTATGATCCTCAATGGTGTTCCATTTTCTGATCACTTCCGTGTTATTGCCGGGGTTAATGACAAACCGACTATCCTTGTGAACTACAACCAGCAAAAAGATACGTTTGTGTTTGTGGACTTTTTGAAGGAGCTTGAGAGCATCTTTGAATCTGCTATGAACAAGATCAACAAAGGTTACTCAGATGAGGAAAGTGATACGGATTAA 3000 0.3857 MLNKLYVCVLEAKDLPVKNSRVKLKLGKFKYKTRILRNTFNPIWNEEFVFKVKDIAEDVLVVNVVNHSDESKVVDFVGEVRIPVSSVDFEDHRQILPPTWFELQCSNKSGKFFNKFCGKILLTISLHYKDHVSFMNHKHSPNSTASIKDSTESERLHISSHQSFHKNRKMSEGKQLLKVIANRLERIFNKKERNSKSVDCSETSNSLSDYEDSVQENSPSCSFEEGIALMESRDNQPESPENLKGGILVDKIYEVSPYNLNVVLFAPDSQFRKDLAEQQGTTNLQEGAWSWKDDDMSCLTRVVNYTKAASKLVKALNTTEEQTYIRVAKDEFDVLVSVCTPEVPYGNSFRVEILYKIMPGEDVSCVEESSHLVISWGMVFLQSTLMKGVIENGAKQGLKESFDQFSNLLAQRFKVLDKEDLINKEHLLATLQTESQWNWWQAITYFWNFTVVSTFFMCLYVLLHILRCGPNQPRGLEFRGIELPDSLGELVTSGILVIQLERVYHMVSHFVQARFQMGTDHGMKAHGDGWVVTVALIEGVDLVSLESTGLSDPYVVFTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSVLYVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWIVLEGKLAQSAQSKLHLRIFLDNNKGVEIIKDYLEKKEREVGKKFNLPSPQRNSTFQKLFGLPPEEFLINDFTCSLKRKLHLQGRLFLSARVLGFYANLFGHKTKFFFLWEDIDNILVLPPSLASLGSPTLAIILRRGRGIDARHGAKTQDEEGRLRFHFQSFVSFGSASRTIMALWRARMLNPYQKEQTTEEHEDQDVLVMPEDSGSILEDEAKMSRIYSAELPIKIGSVMEIFYGGNIEHKIMKRTGCMDYDTTPWEPVKPDVLERHVTYQFNRHVSVFDVTSTQQKYPNTNTEGWIVNEVMILNGVPFSDHFRVIAGVNDKPTILVNYNQQKDTFVFVDFLKELESIFESAMNKINKGYSDEESDTD 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05810 999 MobiDBLite consensus disorder prediction 150 169 - -
Mepo3g05810 999 Pfam VAD1 Analog of StAR-related lipid transfer domain 248 397 IPR031968 -
Mepo3g05810 999 Pfam VAD1 Analog of StAR-related lipid transfer domain 848 946 IPR031968 -
Mepo3g05810 999 ProSiteProfiles VASt domain profile. 844 996 IPR031968 -
Mepo3g05810 999 MobiDBLite consensus disorder prediction 198 219 - -
Mepo3g05810 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 138 IPR035892 -
Mepo3g05810 999 CDD C2 532 632 - -
Mepo3g05810 999 MobiDBLite consensus disorder prediction 199 219 - -
Mepo3g05810 999 MobiDBLite consensus disorder prediction 139 169 - -
Mepo3g05810 999 ProSiteProfiles C2 domain profile. 511 630 IPR000008 -
Mepo3g05810 999 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 530 655 IPR035892 -
Mepo3g05810 999 Gene3D - 681 808 IPR011993 -
Mepo3g05810 999 SMART gram2001c 683 749 IPR004182 -
Mepo3g05810 999 Gene3D C2 domain 515 650 IPR035892 -
Mepo3g05810 999 ProSiteProfiles VASt domain profile. 244 417 IPR031968 -
Mepo3g05810 999 Pfam C2 domain 532 630 IPR000008 -
Mepo3g05810 999 Pfam C2 domain 4 90 IPR000008 -
Mepo3g05810 999 Pfam GRAM domain 684 750 IPR004182 -
Mepo3g05810 999 CDD C2 5 103 - -
Mepo3g05810 999 PANTHER BNAA05G37250D PROTEIN 4 947 IPR044511 -
Mepo3g05810 999 ProSiteProfiles C2 domain profile. 1 101 IPR000008 -
Mepo3g05810 999 SMART C2_3c 4 96 IPR000008 -
Mepo3g05810 999 SMART C2_3c 531 630 IPR000008 -
Mepo3g05810 999 Gene3D C2 domain 2 129 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05810 Mepo-Chr3 72304750 72310322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05810 2 140 Lipid Metabolism Gene Families AT1G22610 32.192 1.18e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05810 - - gmx:100811103 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05810 3 72304750 72310322 Mepo3g05810 3 72304750 72310322 ECH