Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05788 ATGGGTGGATCACATTCAAAACGTAGGGGCTCTAGGCAACGTTCTTCATCCTCAAGGTCAAATCCTTTGTTTCCTCAATATCAATCACCTTATTTGCCACAACAAACTCAAGATCATGGCTATAATTATGGGGTTCCACCTCCAGCTCAAAGCTATGGTGGTGTTGGTCATGTTTCTCAACAAAGCAAGAAGTCAGACAAGAAGTTTACAAAAATAGGTGATGATTATAATAGCTTGGAACAGGTAACTGAGGCTCTAGCGAGTGCTGGCCTAGAGTCTTCTAATCTCATTGTTGGTATTGATTTTACAAAGAGCAATGAATGGACAGGTGCAAGGTCGTTTCAAAGGAGATGCCTGCATGACATTGGGAATGAGCCAAATCCATATGAACAAGCTATATCTATCATTGGGAAAACATTGTCGTCCTTTGATGAGGATAACTTGATTCCCTGTTTTGGATTTGGAGATGCATCAACACATGACCAGGAAGTTTTTAGTTTTAATGCTGAGGATAGATTTTGTCATGGATTTGAAGAAGTGCTGTCACGGTATAGGGAATTGGTCCCTCAATTAAGGCTTGCAGGACCGACATCATTTGCCCCAATCATTGAGATGGCAATCACCATTGTTGAGCAAAGTGAAGGCCAATACCATGTTTTATTGATTATAGCAGATGGACAGGTGACAAGAAGTGTTGACGTTGATCATGGGCAATTGAGTGCACAAGAAAAGAAAACTGTAGAAGCTATTGTGAAAGCTAGTGAATATCCCCTATCAATTGTATTAGTCGGAGTTGGAGACGGGCCATGGGACATGATGAAACAGTTTGACGATAACATTCCTGCACGAGCATTTGATAATTTTCAGTTTGTGAATTTCACGGAAATAATGTCGAAGAACATGGATCGGTCTCGAAAGGAAGCTGAGTTTGCACTTTCTGCCTTAATGGAAATACCTGACCAGTACAAGGCAACACTAGAACTTAGTATATTGGGCAACCGTAGTAGAAGGAATGATATACACAGGATTCCTCTACCGCCACCTCAATATGGCGCACCATCTTTCAACTCCCCAAAAGCTTCCAGTCAAAACAGTTTTCGCCCCAGTGCACCATCTCAGAAACACGGTGTTACCACGAACCCCCACGCAAGTTCTGCGTCTGATAATCAGTTTTGTCCCATTTGCCTCACTAATCCGAAGGACATGGCCTTTGGTTGCGGACATCAGACATGCTGCGAGTGCGGACAGGATCTTCAGTTATGCCCCATTTGCAGGAGTAGCATTAATACCAGAATAAAACTTTATTAG 1308 0.4243 MGGSHSKRRGSRQRSSSSRSNPLFPQYQSPYLPQQTQDHGYNYGVPPPAQSYGGVGHVSQQSKKSDKKFTKIGDDYNSLEQVTEALASAGLESSNLIVGIDFTKSNEWTGARSFQRRCLHDIGNEPNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFNAEDRFCHGFEEVLSRYRELVPQLRLAGPTSFAPIIEMAITIVEQSEGQYHVLLIIADGQVTRSVDVDHGQLSAQEKKTVEAIVKASEYPLSIVLVGVGDGPWDMMKQFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALSALMEIPDQYKATLELSILGNRSRRNDIHRIPLPPPQYGAPSFNSPKASSQNSFRPSAPSQKHGVTTNPHASSASDNQFCPICLTNPKDMAFGCGHQTCCECGQDLQLCPICRSSINTRIKLY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05788 435 SMART VWA_4 93 296 IPR002035 -
Mepo3g05788 435 Pfam Copine 118 331 IPR010734 -
Mepo3g05788 435 PANTHER COPINE FAMILY PROTEIN 1 15 412 - -
Mepo3g05788 435 Pfam Zinc finger, C3HC4 type (RING finger) 389 429 - -
Mepo3g05788 435 MobiDBLite consensus disorder prediction 15 41 - -
Mepo3g05788 435 SUPERFAMILY vWA-like 95 277 IPR036465 -
Mepo3g05788 435 SUPERFAMILY RING/U-box 386 431 - -
Mepo3g05788 435 MobiDBLite consensus disorder prediction 1 66 - -
Mepo3g05788 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 370 435 IPR013083 -
Mepo3g05788 435 ProSiteProfiles Zinc finger RING-type profile. 392 425 IPR001841 -
Mepo3g05788 435 MobiDBLite consensus disorder prediction 354 386 - -
Mepo3g05788 435 MobiDBLite consensus disorder prediction 338 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05788 Mepo-Chr3 72055466 72059861 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05788 K16280 - gmx:100809850 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05788 3 72055466 72059861 Mepo3g05788 3 72055466 72059861 ECH