Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05761 ATGCTAAAATCAACATTGACACCCATTTTTTGTGCACTAGCGCCCAAACCAAAACCATCAACCCGCGTAATCACAAACACTTTTTCAAACAGCACACCAACTGTTCGACAAAACACCTCAGTCAAAAACAGCACCCCTTCTTCAGCTTACATTCACCTCCCTTTCTGTCGTAAACGCTGCCACTACTGTGACTTCCCCATCGTCGCTCTTGGCTCCGCTTCAACGCAAACACATGATGACCCACGTGTCATAAACTACATTCAATGGCTCTGCAGAGAAATCAATGCTACTAAAATAGAAGATGAACTTGATTCTGCAAAGACGCCGCTTCAGACGGTGTTTTTTGGTGGTGGGACACCGTCTTTGGTTCCGCCAAGTATGGTTGGTACGGTTTTGGAGACGCTGAGGATCAAATTTGGGGTGAGTGAAAGTGCTGAAATTTCGATGGAAATGGACCCAGGTACGTTTGATTGTAAGAAGATGGAGGAGATGATGTTGTTGGGAGTGAATAGAGTTTCTTTGGGAGTTCAAGCGTTTCAGGAGAAGCTGTTGAAGAGTTGTGGGAGGGCACATGGTTTGGATGAGGTTCATGAGGCTATTGATATTGTTAAAAAGTGCGGGGTTGAGAATTGGAGTATTGATCTTATTGCTTCATTGCCTCATCAGACTAGTGAAATGTGGGAGGAAAGTTTAAGGCACGCCATTGAGGCACAACCAACTCATGTTTCTGTTTATGATCTGCAAATTGAACAAGGCACAAAATTTGGAAGGCTGTATTCACCAGGGGAATTTCCATTGCCTTCTGAGACACAATCCGCTGATTTTTATATGATGGCTTCAAGGATGCTTCGTGATGCCAATTATAACCATTATGAAATCAGCAGCTACTGTAAGAGTGGTTATGAGTGTAGACACAACTTTACCTATTGGAAGTACAAGCCTTTCTATGCCTTTGGCCTCGGCTCTACTAGTTTTATTGGTGGTTTGAGGTTTTCAAGACCCAGGAAGGTGAATGAGTACATGAAATTCGTGGAAAATCTGGAAAATGGATCAGTAAATAGCTCATCTGATGACAACATTAATAGCAAGGACAAAGCATTGGATGTTGTGATGCTGTCCTTGAGAACAGCAAGAGGTCTAGACTTGAAGCGTTACCAAGAATCATTTGGCAGCTCTCTGGTTCTCTCTCTGGTTGAGGTTTATAAACCTTATGTTGAGAGTGGACATGTGGTTTTCTTGGACGAGCAAAGGAGAGCTGTTAGAATAGACGACATCAACAATTCTCTTCTGGGCGAAACTGACTTAGAAAAGAGAGTGGCCTATATGAGGCTAAGTGATCCAAATGGTTTCCTTTTATCAAATGAGTTAATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGAAGGATTATCCTTGTGCACTCCAAGAAGCTACCTGA 1437 0.4287 MLKSTLTPIFCALAPKPKPSTRVITNTFSNSTPTVRQNTSVKNSTPSSAYIHLPFCRKRCHYCDFPIVALGSASTQTHDDPRVINYIQWLCREINATKIEDELDSAKTPLQTVFFGGGTPSLVPPSMVGTVLETLRIKFGVSESAEISMEMDPGTFDCKKMEEMMLLGVNRVSLGVQAFQEKLLKSCGRAHGLDEVHEAIDIVKKCGVENWSIDLIASLPHQTSEMWEESLRHAIEAQPTHVSVYDLQIEQGTKFGRLYSPGEFPLPSETQSADFYMMASRMLRDANYNHYEISSYCKSGYECRHNFTYWKYKPFYAFGLGSTSFIGGLRFSRPRKVNEYMKFVENLENGSVNSSSDDNINSKDKALDVVMLSLRTARGLDLKRYQESFGSSLVLSLVEVYKPYVESGHVVFLDEQRRAVRIDDINNSLLGETDLEKRVAYMRLSDPNGFLLSNELIALAFGVIDSWKDYPCALQEAT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05761 478 SMART MiaB 46 278 IPR006638 GO:0003824|GO:0051536
Mepo3g05761 478 SFLD Radical SAM 44 414 IPR007197 GO:0003824|GO:0051536
Mepo3g05761 478 SUPERFAMILY Radical SAM enzymes 43 415 - -
Mepo3g05761 478 Pfam Radical SAM superfamily 51 232 IPR007197 GO:0003824|GO:0051536
Mepo3g05761 478 NCBIfam radical SAM family heme chaperone HemW 48 409 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Mepo3g05761 478 Gene3D tm_1862 like domain 54 263 IPR023404 -
Mepo3g05761 478 SFLD HemN-like, clustered with heat shock genes 44 414 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Mepo3g05761 478 ProSiteProfiles Radical SAM core domain profile. 41 286 IPR007197 GO:0003824|GO:0051536
Mepo3g05761 478 PANTHER COPROPORPHYRINIGEN III OXIDASE 29 466 IPR034505 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05761 Mepo-Chr3 71765716 71767748 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05761 - - gmx:100779022 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05761 3 71765716 71767748 Mepo3g05761 3 71765716 71767748 ECH