Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05699 ATGGACCAATTCAACAACGTCGATCTCGAATTCGCTAACTTCGAAGATTACGTCGAATTCGAATTCTCCGATTTCGAAGATGAAGAACAACAAACATCCTTCTCCGAAAATCCTCCTCACCGTAACACCTCCGATACTGACTCCGACTTCGAAGACGATTTCCAAACGAGTAATGTGAAGACTGATACTTCAGCTTTGGAAGCACGAAACGGGAAAGATATTCAAGGAATTCCATGGGAGAAGCTTAATTATAGTAGAGATGAATATCGTGAAACTCGTTTGAAACAGTATAAGAATTACGAGAGTCTCACGCGCTCTCGTGAAGACCTTGACAAGGAATGCTTGGAAGTGGAGAAAGGGAATTCGTTCTATGATTTTCAGTTTAATACAAGGCTTATCAAATCAACAATTGCACATTTTCAGCTGAGGAATCTGTTGTGGGCAACATCAAAGCATGATGTTTACCTTATGCAAAACTACTCTGTGATGCATTGGTCCTCATTACTACAAAGGGGTAAAGAAGTGCTTAATGTGGCAAAACCGGTTATTCCAACCCTTCAGAAGCATTGTGGATTAGCCCACCCTGTCTCGCGAGTGCAAATCAGCACCATGGCTGTTAAGGAAAACTTGATGGTGGCAGGTGGTTTCCATGGGGAGCTTCTTTGCAAGAATTTGAATCATTCTGGAGTTGCATTCTGCAGTAAAATAACTACAGATGATAGTGCTATAACCAACGCCGTGGATGTTTTCCGCAATCCCAGTGGGTCGTTGAGGGTCATTGCAGCAAATAATGATTCCCAAGTTCGGGTTTTTGATGCAGAGAATTTTGCTTCTCTGGGTTGTTTCAAGTATGATTGGTCTGTCAATAATGCTTCTGTTAGTCCAGATGGAAAGTTGTTAGCTGTTCTTGGGGACAGTACTGAGGGCCTGATAGCTGATGCTAATACCGGGAAGGTCACTGGAAACCTAAAAGGGCATTTGGATTATTCTTTCTCATCTGCTTGGCACCCCAATGGACAAATATTGGCTACTGGGAATCAGGACACAACATGCAGGTTGTGGGACATAAGAAATCTTTCCGAGTCCATCGCGGTATTAAAGGGAAGAATGGGTGCAATAAGAGCCTTAAAATTCACATCAGATGGGAAGTTTTTGGCCATGGCTGAGCCAGCAGACTTTGTCCATATTTTTGATTCACATTCTGGTTATGTACAAAGTCAAGAGATTGATATATTTGGTGAAATTGCTGGTTTATCTTTTAGCCCTGACACAGAGGCTCTGTTTGTCGGCGTGGCTGACCGAACCTACGGTAGCTTGTTAGAGTTCACCAGAAAGCATTATTATCAGTATCTGGACTCTATGATCTAA 1368 0.4247 MDQFNNVDLEFANFEDYVEFEFSDFEDEEQQTSFSENPPHRNTSDTDSDFEDDFQTSNVKTDTSALEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYESLTRSREDLDKECLEVEKGNSFYDFQFNTRLIKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGKEVLNVAKPVIPTLQKHCGLAHPVSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDDSAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRALKFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05699 455 SUPERFAMILY WD40 repeat-like 185 435 IPR036322 GO:0005515
Mepo3g05699 455 SMART WD40_4 218 272 IPR001680 GO:0005515
Mepo3g05699 455 SMART WD40_4 359 398 IPR001680 GO:0005515
Mepo3g05699 455 SMART WD40_4 316 355 IPR001680 GO:0005515
Mepo3g05699 455 Pfam WD domain, G-beta repeat 318 355 IPR001680 GO:0005515
Mepo3g05699 455 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 34 452 - -
Mepo3g05699 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 364 IPR001680 GO:0005515
Mepo3g05699 455 ProSitePatterns Trp-Asp (WD) repeats signature. 342 356 IPR019775 -
Mepo3g05699 455 MobiDBLite consensus disorder prediction 24 55 - -
Mepo3g05699 455 FunFam WD-40 repeat family protein 236 452 - -
Mepo3g05699 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 323 358 - -
Mepo3g05699 455 Gene3D - 204 449 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05699 Mepo-Chr3 71040949 71045950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05699 305 435 Miscellaneous Gene Families AT5G08390 30.986 1.06e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05699 - - mtr:25489425 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05699 3 71040949 71045950 Mepo3g05699 3 71040949 71045950 ECH