Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05683 ATGGGTTCGTTTTTCAGTGTGGCGAAGAATACTAATTCGGATCAAAGTGAGTGGGATAGAGTCTCTTTGAATGATACATGTAAGAGGCAAAGAATGTCGCCTACCTTCGATGAAGAGAATCCAAGACTGTTTCCAAATCTCCCAGATGAGGTATCAATTCAGATTATTGCTAGACTTCCGAGAATTTGTTACTTCAATGTGAGGATGGTGTCGAGGAAGTGGAAGTCGACTGTCACGAGTTCGGAACTATATAAAGTAAGAAAAGAACTCGGGACAACGGAAGAGTGGCTGTATTTCTTGGTTAAGTTAGGAGAAAATAAGCTTCTATGGCATGCCGTTGATCCAAGATCAGGGATATGGCAGAGATTGCCTACTATGCCTAATGTTGTTGATGAAGAAGAATCTAAAAAGGGTTCTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGAATTGCTGAAGTTATTAGAGGCTTTCTTGGAAAGAGGGATGCATTTGATGAAATGCCCTTTTGCGGTTGTGCTATTGGAGCTGTTGGTGGATGTCTCTATGTTCTAGGTGGATTCTCTAAAGCTTCGACTATGAGATGTGTCTGGCGATTCGACCCGATGCAGAATACGTGGAGCAAGGCGACTTCTATGTCTACTGGTCGGGCATACTGTAAGACAGGGATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCCAGCTGGATTGATACCTCTTCAATCTGCTGAAGTTTTTGATCCCTTGACAGGTACATGGTCAGACGTCCCTAGTATGCCATTCTCGAGAGCTCAGGTTCTTCCCAACGCTTTCTTGGCCGACATGTTAAAGCCGATTGCCACAGGGTTGACAGCATACATGGGAAGGTTATGCGTTCCACAGAGTTTATATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTGAAACAAACTCATGGATAGAAATGCCACTTGGTATGGGCGAAGGTTGGCCCGCACGGCAAGCAGGTACAAAATTGAGTGTCGTAGTCGATGGTGAATTATATGCTTTTGATCCTTCCAATACTATGGACAGTGGAAGGATCAAGGTATATGATCAAGGAGAAGATGCTTGGAAAGTTGTCATTGGAAAAGTCCCTATATATGGTTCTGATGATTCAGAATCTCCTTATCTTCTTGCTGGTTTCCATGGAAAACTTCATGTCATCACAAAAGATGCTGATAATAACATTGCTGTCCTGCAGGCCGAGCTGCGCAGTAATTTGGATTCTTCACCATCATCACCCTCCTCAACACTGTCACAAAGTTCCTTACATGAATTTGTGGACCCGCCGGCCGAAACAGACGCAGTTGTTTGGAAGATAGTTGCTAGTAAGTGTTTGGGACAGGCTGAACTAGTTAGTTGCCAAGTAATTGATATGTAG 1440 0.4333 MGSFFSVAKNTNSDQSEWDRVSLNDTCKRQRMSPTFDEENPRLFPNLPDEVSIQIIARLPRICYFNVRMVSRKWKSTVTSSELYKVRKELGTTEEWLYFLVKLGENKLLWHAVDPRSGIWQRLPTMPNVVDEEESKKGSSSRLWMWNMVEGIRIAEVIRGFLGKRDAFDEMPFCGCAIGAVGGCLYVLGGFSKASTMRCVWRFDPMQNTWSKATSMSTGRAYCKTGILNNKLYVVGGVSQGPAGLIPLQSAEVFDPLTGTWSDVPSMPFSRAQVLPNAFLADMLKPIATGLTAYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPLGMGEGWPARQAGTKLSVVVDGELYAFDPSNTMDSGRIKVYDQGEDAWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDADNNIAVLQAELRSNLDSSPSSPSSTLSQSSLHEFVDPPAETDAVVWKIVASKCLGQAELVSCQVIDM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05683 479 SMART fbox_2 47 87 IPR001810 GO:0005515
Mepo3g05683 479 PANTHER OS02G0202900 PROTEIN 25 477 IPR045887 -
Mepo3g05683 479 Pfam Kelch motif 220 268 IPR006652 GO:0005515
Mepo3g05683 479 Pfam Kelch motif 172 217 IPR006652 GO:0005515
Mepo3g05683 479 SMART kelc_smart 231 277 IPR006652 GO:0005515
Mepo3g05683 479 SMART kelc_smart 184 230 IPR006652 GO:0005515
Mepo3g05683 479 CDD F-box_AtAFR-like 43 87 - -
Mepo3g05683 479 SUPERFAMILY Kelch motif 102 410 IPR015915 GO:0005515
Mepo3g05683 479 Gene3D - 104 385 IPR015915 GO:0005515
Mepo3g05683 479 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Mepo3g05683 479 SUPERFAMILY F-box domain 31 87 IPR036047 GO:0005515
Mepo3g05683 479 Pfam F-box domain 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05683 Mepo-Chr3 70841333 70843972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05683 37 266 Miscellaneous Gene Families AT4G33900 27.350 5.47e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05683 - - gmx:100806691 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05683 3 70841333 70843972 Mepo3g05683 3 70841333 70843972 ECH