Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05673 ATGGATGCACAAGCGGGTTTATCACTGGGGTTAAACGCTACCATGCCATCTCCAACAAATTCATCAAATGGGTCACTCACTGATAACTCTTTTTCATTCCATTTGAATTCAAAACCAAACCCTTCTCTTTCATGGCGTTTACTTCACGAAAAACCAGACAACAATGTTCATCTTAATCTCATAAAACAAGAACAGGAACAAGATGAAGTTGTTGATGGTGTTGGTGAAGAAGAAGGTGAAACAATTGATTTCATGGGCAGGCCTATTTGTTTCAAGAGGAGATTAGAGGAAGAAACACAACAAAGTTTTGTTCCGGCGAAGCGTGTTGCGGTGGATTCCAATGCTGTGAGTTGGGGGAATCAACCTTTGAGTGTTGCTGATCCTGAAATATTTACCATTATGGAAAAAGAAAAGTTGAGACAGTTTAAAGGAATTGAATTAATTGCTTCTGAGAATTTTGTTTGTAGGGCTGTGATGGAAGCACTTGGTAGTCATTTGACTAATAAGTATTCAGAGGGAATGCCAGGAGCGAAATATTATACCGGTAATCAGTATATCGATCAGCTTGAGTTTCTTTGTTGTGAGCGTGCATTGAATGCTTTTCATCTTGATTCAAGTAATTGGGGTGTTAATGTTCAGCCTTATTCATGTACTTCAGCAAATTTTGCTGTTTATACTGGTCTTTTGAATCCTGGTGATAGGATTATGGGTTTGGATTCGGCGTCTGGTGGACATTTGAGTCATGGTTATTATACTCATGGCGGGAAGAAGGTTTCGGCGGCTTCTATATTTTTTGAGACTTTGCCTTATAAGGTGAATCCATTGACTGGTTATATTGATTATGATAAGGTTGAGGAGAAAGCAGTGGATTATAGGCCGAAGATACTTATTTGTGGTGGTAGTTCTTATCCTAGAGAATGGGATTATGCAAGGTTTAGGAAGATTGCTGATAAATGTGGAGCTGTTTTGATGTGTGACATGGCTCATATTAGTGGACTTGTTGCGGCTAAGGAAGCTGCAAGTCCATTTGATTACTGTGATATTGTTACCTCAACAACCCACAAAAGTCTTCGAGGTCCAAGGGGAGGTATTGTCTTTTACCGAAAAGGGCCAAAACCAAGGAAGCAAGGCTTTGTTCTTAATCACGGAGATGATAATAGTAATTATGATTTTGAGGAGAAGATAAACTTTGCTTTATACCCATCGTTGCAAGGAGGTCCCCACAACAATCACATTGCTGCCCTTGCCATTGCTTTGAAACAAGTTGCGACTCCAGAGTATAAAGCATATATGCAGCAGGTGAAGAGAAATGCACAGGCATTAGCAACTGCGTTGTTGAAAAGAAAATGCAGATTGGTTACTGATGGGACTGACAATCATCTTTTGCTCTGGGATATCACTGCACTCGGTTTGATTGACAGAAACTATGAGAAGGTTTGTGAGGCGTGTCACATCACTCTTAATAAGTGTGCCATTTATGGTTCTATTTCTTCTGGAGGAGTGAGAATCGGAACTCCTGCAATGACATCAAGAGGCTGTTTAGAGGATGATTTTGAGACCATGGCAGATTTTCTTCTGAGGGCAGCTCAGATTACCAGCATAATACAGAGGGAACATGGTAAATCATGCAAAGATTTTCTCAAGGGTCTTCAGAGTAATAAAGATATTTTTGACCTCAGAAATCGGGTTGAGACATTTGGCTCCCAGTTTGAAATGCCAGGATTCAATTATTGA 1734 0.4002 MDAQAGLSLGLNATMPSPTNSSNGSLTDNSFSFHLNSKPNPSLSWRLLHEKPDNNVHLNLIKQEQEQDEVVDGVGEEEGETIDFMGRPICFKRRLEEETQQSFVPAKRVAVDSNAVSWGNQPLSVADPEIFTIMEKEKLRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKYYTGNQYIDQLEFLCCERALNAFHLDSSNWGVNVQPYSCTSANFAVYTGLLNPGDRIMGLDSASGGHLSHGYYTHGGKKVSAASIFFETLPYKVNPLTGYIDYDKVEEKAVDYRPKILICGGSSYPREWDYARFRKIADKCGAVLMCDMAHISGLVAAKEAASPFDYCDIVTSTTHKSLRGPRGGIVFYRKGPKPRKQGFVLNHGDDNSNYDFEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKRNAQALATALLKRKCRLVTDGTDNHLLLWDITALGLIDRNYEKVCEACHITLNKCAIYGSISSGGVRIGTPAMTSRGCLEDDFETMADFLLRAAQITSIIQREHGKSCKDFLKGLQSNKDIFDLRNRVETFGSQFEMPGFNY 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05673 577 Gene3D Aspartate Aminotransferase, domain 1 127 573 IPR015422 GO:0003824
Mepo3g05673 577 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g05673 577 Pfam Serine hydroxymethyltransferase 124 524 IPR039429 -
Mepo3g05673 577 CDD SHMT 127 532 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo3g05673 577 Hamap Serine hydroxymethyltransferase [glyA]. 122 574 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo3g05673 577 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 115 576 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo3g05673 577 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 347 363 IPR019798 GO:0030170
Mepo3g05673 577 FunFam Serine hydroxymethyltransferase 152 370 - -
Mepo3g05673 577 SUPERFAMILY PLP-dependent transferases 118 575 IPR015424 -
Mepo3g05673 577 MobiDBLite consensus disorder prediction 10 26 - -
Mepo3g05673 577 Gene3D - 152 432 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05673 Mepo-Chr3 70745459 70750850 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05673 K00600 - gmx:100776419 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05673 3 70745459 70750850 Mepo3g05673 3 70745459 70750850 ECH