Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05672 ATGGCTGCTTCTCTCTCGAATCAATCTCTATTAGCTTGTTCTTCATCATCATCATCTTCTTCTTCATTCTCTTCAAAATCTCCAAAACCACCCAATTTCGTTCATTTTCCATCTCGCCCCTTTTACGCCTCCAACACCATCTTAGGGTTTCCAACTCTCAATTCAACCTCATCCCTCTTCGCTTCCAAAGAATCCTTTCCAACTACAAATGATAAAATAGACAAGACTCGGAATGGTGAAGATAATCAAGATTTACCAAGCTTATTGGTCCTTATTAAAGCATACAAGAAAGCCTTTCTTAATGGCGATGGAAAGACCGCATTGTTGATTGAAGAAATAATACAATCAAAGGCAATTGAAAGGAATAAATTGATTCAGAAAGTATCTAGTTTATCGGCGGATAAAGTTTCTTGCAAGGAGCAATATCTTCGTTTACAAGCGGATTTTGATAACTTTAGGAAAAGATGTGAGAAGGAAAGAATTAGCATTCAATCGGATGCTCAACAAGAATTCGTTAAAAAGCTTTTGTTGATGGTGGACAGTTTTGAGAGAGTTAAACAACAGATTGAAGTGGAGACGGAGAAAGAGAAGAAGATTGATGCGAGCTATCAAAGTCTTTACAAGCAATTTGTAGAGACTTTGAGGAGTCATCATGTTTCTGTGGTTGCAACAGTTGGCAAGCCTTTTAATCCCTTGATACATGAAGCCGTTGGACGTGAGGAGTCCGAAGTGTTTAAGGAAGGGATTATAATTAAAGAATCCCGTCGAGGTTTCTTGCTCAAAGATAAGGTTGTAAGGCCAGCACTTGTGAAGGTTTCCTTAGGTCCCGGGAATAAGAAATCTTCAGTGGCACCTACCCAGTCCTTGGAGCAGCCATCAACAGCTGCTAGAATTGATGAAAGATAA 906 0.3929 MAASLSNQSLLACSSSSSSSSSFSSKSPKPPNFVHFPSRPFYASNTILGFPTLNSTSSLFASKESFPTTNDKIDKTRNGEDNQDLPSLLVLIKAYKKAFLNGDGKTALLIEEIIQSKAIERNKLIQKVSSLSADKVSCKEQYLRLQADFDNFRKRCEKERISIQSDAQQEFVKKLLLMVDSFERVKQQIEVETEKEKKIDASYQSLYKQFVETLRSHHVSVVATVGKPFNPLIHEAVGREESEVFKEGIIIKESRRGFLLKDKVVRPALVKVSLGPGNKKSSVAPTQSLEQPSTAARIDER 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05672 301 FunFam Protein GrpE 218 273 - -
Mepo3g05672 301 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 122 217 IPR013805 -
Mepo3g05672 301 PANTHER GRPE PROTEIN 84 279 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 PRINTS GrpE protein signature 143 159 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 PRINTS GrpE protein signature 171 186 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 PRINTS GrpE protein signature 253 272 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 PRINTS GrpE protein signature 226 241 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 MobiDBLite consensus disorder prediction 279 294 - -
Mepo3g05672 301 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 220 274 IPR009012 GO:0006457
Mepo3g05672 301 CDD GrpE 139 272 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 Hamap Protein GrpE [grpE]. 80 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 Gene3D - 109 215 IPR013805 -
Mepo3g05672 301 MobiDBLite consensus disorder prediction 275 301 - -
Mepo3g05672 301 Pfam GrpE 115 273 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 Gene3D Head domain of nucleotide exchange factor GrpE 218 273 IPR009012 GO:0006457
Mepo3g05672 301 ProSitePatterns grpE protein signature. 229 272 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g05672 301 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05672 Mepo-Chr3 70738445 70741086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05672 K03687 - gmx:100809893 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05672 3 70738445 70741086 Mepo3g05672 3 70738445 70741086 ECH