Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05668 ATGGAAAACGCCGACGCTTCTTCCGGTTTACACGACTTCCTTGAGCGCATGCGCCAACCCGCCGCCGCCGATTTCGTCAAAGCCATCAAAAGTTTCATTGTTTCGTTTTCAAATCATGGACCCGATCCTGAGAGAGACAGTGACGCCGTTCAAGACTTTCTTGCTAATATGGAAGCTGCTTTCAAAGCTCATCCTCTTTGGGCCGGTTGCTCTGATGATGAACTCGAAAGTGCCGGTGAAGGTCTCGAGAAGTACGTTATGACGAAGTTGTTTCCCCGTGTATTTGCTTCAGTTCCAGATGATGTAAAACTTGATGACCAGCTTTCGGAGAAGATGGCTTTGATTCAACAGTTTATTCGACCAGAAAATTTGGACATCAAGCCACCATTTCAGAACGAAACATCATGGTTGCTTGCTCAGAAAGAATTACAGAAGATCAACATGTACAAGGCACCAAGAGACAAACTTACTTGTATTCTAAACTGCTGCAAGGTTATTGGTAACTTGTTGCTTAATGTTTCTCTTGCTTCCAAAGATAATCCTCCTGGAGCTGATGAATTTCTTCCTGTGCTAATCTATGTTACCCTAAAGGCAAACCCGCCACAACTGCACTCAAATCTACTGTACATACAAAGGTTTAGACGCCAATCTCGGTTGGTTGGGGAAGCATCATATTATTTTACAAACATGCTCTCTGCCGAATCCTTCATCTCAAACATTGATGCAAAAGCCATTTCGATGGATGAAACTGAGTTTGATAGAAACATGGAATTTGCTCGTGCTCTTCTTTCAGGGCTTTCAGTTGATACGCAAGATCCCAATTCACCTTATCAGAATCATGGACAGCATGACAAAAATAAAGCTCCATCATCTGATGCAAAATTAGAAAGTAAGAAAGTGACTTTTGCAAGTGAATCATCGATCACGAAAGTTCCATCACTCTCAGATTTGGAGAATAAAGGGGCAAGTATGATAATTAAGGAGGATAAGTTGAATGATGTTTTCAGGGAGTTTCCATATTTGTTTGCTAGTGTAGGTGATCTAACAGTAAGTGACGTCGAAGACCTGCTAAAGAATTACAAACGATTAGTTTCCAAATATGTTTGTCTTTCCAAAGGGTTAGGTGTCTCTTCTACATCTCATCTTCCATCCAATCCTCAAATTAATGCTCAGCAGGACCATGTTGAAACCCTTTCCAAAGGGTTAACCTCCTCTTCTTCATCTCATCATCCATTCAATCCTCAAAATAATGCTCAGAACCATGTTGAGAGTGAGACCACAATAGATTCTTCTGATGATGGACCTGTAGCTTCCAATGACAAATCAGAAAAATCTCTTGATACATCAGAGGATAACTCAGATCCTGAGAAAAAAAGTGATTCTGGTTTGCCACAGGATGAGGCAGCTGCACCAGAGGGTGGTACCCCCTCTTAA 1434 0.4163 MENADASSGLHDFLERMRQPAAADFVKAIKSFIVSFSNHGPDPERDSDAVQDFLANMEAAFKAHPLWAGCSDDELESAGEGLEKYVMTKLFPRVFASVPDDVKLDDQLSEKMALIQQFIRPENLDIKPPFQNETSWLLAQKELQKINMYKAPRDKLTCILNCCKVIGNLLLNVSLASKDNPPGADEFLPVLIYVTLKANPPQLHSNLLYIQRFRRQSRLVGEASYYFTNMLSAESFISNIDAKAISMDETEFDRNMEFARALLSGLSVDTQDPNSPYQNHGQHDKNKAPSSDAKLESKKVTFASESSITKVPSLSDLENKGASMIIKEDKLNDVFREFPYLFASVGDLTVSDVEDLLKNYKRLVSKYVCLSKGLGVSSTSHLPSNPQINAQQDHVETLSKGLTSSSSSHHPFNPQNNAQNHVESETTIDSSDDGPVASNDKSEKSLDTSEDNSDPEKKSDSGLPQDEAAAPEGGTPS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05668 477 Gene3D - 17 97 - -
Mepo3g05668 477 Pfam Vacuolar sorting protein 9 (VPS9) domain 138 241 IPR003123 -
Mepo3g05668 477 MobiDBLite consensus disorder prediction 436 463 - -
Mepo3g05668 477 MobiDBLite consensus disorder prediction 270 284 - -
Mepo3g05668 477 FunFam Vacuolar protein sorting-associated protein 9A 99 265 - -
Mepo3g05668 477 ProSiteProfiles VPS9 domain profile. 102 246 IPR003123 -
Mepo3g05668 477 SUPERFAMILY VPS9 domain 10 257 IPR037191 -
Mepo3g05668 477 Gene3D VPS9 domain 99 265 IPR037191 -
Mepo3g05668 477 Pfam Domain of unknown function (DUF5601) 27 91 IPR041545 -
Mepo3g05668 477 SMART vps9_2 135 255 IPR003123 -
Mepo3g05668 477 MobiDBLite consensus disorder prediction 397 477 - -
Mepo3g05668 477 MobiDBLite consensus disorder prediction 270 295 - -
Mepo3g05668 477 PANTHER RAB GDP/GTP EXCHANGE FACTOR 3 367 IPR045046 GO:0005085|GO:0016192
Mepo3g05668 477 MobiDBLite consensus disorder prediction 397 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05668 Mepo-Chr3 70688609 70693030 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05668 K20131 - gmx:100810958 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05668 3 70688609 70693030 Mepo3g05668 3 70688609 70693030 ECH