Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05585 ATGGAGAGTGTTAAAACCAATTCCAAATACTCATCCATCTTCATAGCTATTTTTGTTCTCTCATCTTTTGCATTGACTTTAGCAAATCCCAAAACTCACGAGCATGAGTTTGTTGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACACACAACACCATAACAGTGAATGGGCAATATCCTGGTCCAACTCTAGAAATCAACAATGGAGACACTTTGGTTGTCAAAGTCACTAACAAAGCTCGTTACAATGTCACCATTCATTGGCATGGTGTTCGACAAATGAGGACAGGATGGGCAGATGGTCCTGAATTTGTGACTCAATGTCCCATTCGTCCTGGAGGGAGTTACACCTACCGTTTCACTGTTAATGGACAAGAAGGGACACTTTGGTGGCATGCTCATAGCTCATGGTTAAGGGCCACTGTTTATGGTGCTTTAATCATTCGTCCTAGGGAAGGAGAGCCCTACCCTTTTCCTAAGCCAAACCGCGAGACACCCATTCTTTTAGGGGAATGGTGGGATGGAAATCCGGTAGATGTTGTGAGACAGGCCCAAAGAACTGGAGCAGCACCAAATATATCTGATGCATACACTATCAATGGTCAACCTGGTGACCTTTACAAGTGCTCTACCAAAGGCACAACAATTATTCCAATACATTCCGGTGAAACAAACCTCGTCCGAGTGATCAATGCAGCACTCAACCAACCACTTTTCTTTACAATTGCCAACCACAAACTAACCGTGGTTGGCGCAGATGCCTCCTACGTTAAGCCCTTCACCACCAACATCCTCATGTTAGGACCCGGCCAAACCACCGATGTCCTAATACACGCAAACCAACCACCTTCTCGTTACTACGTAGCCGCACGCGCCTATCAATCCGCCCAAAACGCACCATTCGATAACACCACCACCACATCCATTCTCCAATACCACAATTCAATCAAAACAAAACCAATCATGCCACCACTCCCTTCTTACAATGACACCAACATAGTTACTAAATTTAGCAGAAGCTTTTTTAGTTTGAGAAAAGCTGAAGTCCCGGCGGAAATTGATGAAAATCTCTTCTTCACAATTGGTTTAGGACTCAACAATTGCCCGAAAAATTTCAGAAAAAGAAGGTGTCAAGGTCCTATTAATGGAACACGCTTCACTGCGAGCATGAACAATGTCTCTTTCACTCTTCCAAACAATATTTCCATTTTGCAGGCTCATTACCATGGAATCCCCGGAGTTTTTACCACTGATTTTCCTGCAAAACCTCCCGTTAAATTCGACTACACCGGTAATGTGAGCCGTTCGCTCTGGCAACCTATTCCCGGGACTAAAGCTTACAAGTTGAAGTTTGGATCAAGGGTGCAGATTGTGTTGCAAGATACAAGTATTGTTACTCCTGAGAATCACCCAATTCATCTTCATGGGTATGATTTCTACATTGTTGCTGAAGGGTTTGGAAATTTTGATGCTAAGAAAGATACTTCAAAATTCAACCTCGTTGATCCACCTATGAGAAATACAGTTGCTGTTCCTGTCAACGGTTGGGCAGTTATCCGGTTTGTTGCGGATAACCCAGGTGCTTGGATTCTGCACTGTCACTTGGATGTTCACATTGGTTGGGGTTTGGCTACTATACTATTGGTAGAGGATGGAGTTGGGAAATTGCAATCAATACAATCACCTCCACAGGACCTGCCTGTCTGTTAG 1713 0.439 MESVKTNSKYSSIFIAIFVLSSFALTLANPKTHEHEFVVEATPVKRLCKTHNTITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPNRETPILLGEWWDGNPVDVVRQAQRTGAAPNISDAYTINGQPGDLYKCSTKGTTIIPIHSGETNLVRVINAALNQPLFFTIANHKLTVVGADASYVKPFTTNILMLGPGQTTDVLIHANQPPSRYYVAARAYQSAQNAPFDNTTTTSILQYHNSIKTKPIMPPLPSYNDTNIVTKFSRSFFSLRKAEVPAEIDENLFFTIGLGLNNCPKNFRKRRCQGPINGTRFTASMNNVSFTLPNNISILQAHYHGIPGVFTTDFPAKPPVKFDYTGNVSRSLWQPIPGTKAYKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWILHCHLDVHIGWGLATILLVEDGVGKLQSIQSPPQDLPVC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05585 570 SUPERFAMILY Cupredoxins 350 570 IPR008972 -
Mepo3g05585 570 Pfam Multicopper oxidase 39 153 IPR011707 GO:0005507
Mepo3g05585 570 Gene3D - 12 151 IPR008972 -
Mepo3g05585 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Mepo3g05585 570 Pfam Multicopper oxidase 165 315 IPR001117 -
Mepo3g05585 570 NCBIfam laccase 31 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mepo3g05585 570 Gene3D - 374 570 IPR008972 -
Mepo3g05585 570 CDD CuRO_1_LCC_plant 35 151 IPR034288 GO:0005507
Mepo3g05585 570 CDD CuRO_3_LCC_plant 415 553 IPR034289 GO:0005507
Mepo3g05585 570 PANTHER MULTI-COPPER OXIDASE 35 555 IPR045087 -
Mepo3g05585 570 FunFam Laccase 163 348 - -
Mepo3g05585 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Mepo3g05585 570 Pfam Multicopper oxidase 420 552 IPR011706 GO:0005507|GO:0016491
Mepo3g05585 570 CDD CuRO_2_LCC_plant 167 313 IPR034285 -
Mepo3g05585 570 Gene3D - 161 347 IPR008972 -
Mepo3g05585 570 SUPERFAMILY Cupredoxins 28 178 IPR008972 -
Mepo3g05585 570 FunFam Laccase 21 151 - -
Mepo3g05585 570 SUPERFAMILY Cupredoxins 159 344 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05585 Mepo-Chr3 69877272 69882230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05585 K05909 - gmx:547704 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05585 3 69877272 69882230 Mepo7g02316 7 34048795 34052585 PCT