Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05558 ATGGAAAATTCACCAAACCCTAACAATCCCAAACCCAAAGAAGAAGAAATCAACGAACACGAAGAAGAAGAAGAAGAAGATGACGAAGACGATGTTCCACAATCCCCACTCTCCCGTCTCCGCGACCAAAAATTCAAACTCGAAACCCTATCCCGACGCCTTTCATCGGAGCTAGTTCCAATCCGAGTCCATGACGTGATAATTCGCGGCAACACAAAAACCAAAGATTGGGTGATCGAAGCCGAACTCAAGGGAATCGAAGATGTTACCACCATGCAAGAGCTTATTCGTGCATCGGAGATTGTGCTTGCTAGGCTTCAGAGTCTCGGGGTTTTTGAATCTAGTAAGATTAGTCTTGAGCCTGGACCGGTCGAGTTGCCGAATACTGCGAATGTTGTTGTTGATATTGTTGAGGCTGCTAGTAGAGTATCTGGTGAATTTGGTGTTTATACCAAACCCGCGACTAGTTCTTGGACTGGTGAAGGTACTATTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTTTGGCTTACGGTGCAAACCAAGCAACAGAGGTGAGTGTAGGGTTATATGCCCCTCGACTTAAAGGAACTTCAAATCCGGTTGTAGCACGGCTGTCCATGCTTTCCCAAGATTGGCAGGAGTTTTCTTCGTACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATCTCAACAAAGCACCATGATTTGACATACACTTTTGGATGGCGTACCTTAACGGATCCATTGCAAATGGCATCCAGGTCTGTAAGAAGGCAGCTTGGGCACGGTTTGTTATCATCTTTGAAGTATACGTTTAAAATTGACAGGAGAAACTCACCAATTAGGCCCACAAAAGGACTTGCCTTTGTTTCTACCACTCACCTTGGTGGCCTTACACCAGATAATCGAAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGCTCGGTATGCTGTCCCATTTGGGTTTTATAATACAGCACTGAACCTAGGGATTTCTGCTGGTGCTATTTTTCCATGGGGACATGGTTTCATGAACAAGCCATCTCCCCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGTACCCTAGGAGGACCAATGACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTGCTGAACCACGAAGACAAAGCAGAGATGTATTCAATGATGACAATAGTGATTCCTCTAAATGGGACTCCATTGGAGGAGATCTTTCTGTTACAGCTTTTGCAGACCTCTCTTTTGATCTTCCAATTAGGTGGTTAAGAGAACACGGGGTCCATGGTCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCGGAGGTTCCTAGAATCCTTCCGAACATCAGTGGGATGTGGATTTGTTGTTCCTACTAGTCTTTTCCGCCTAGAGGCTAACTACTACTACGTGCTCAAGCAGACTGAACATGATCGTGGTAAAAATGGATTTAGGTTCAGCTTCTCAGCTCCTTCATAG 1545 0.4447 MENSPNPNNPKPKEEEINEHEEEEEEDDEDDVPQSPLSRLRDQKFKLETLSRRLSSELVPIRVHDVIIRGNTKTKDWVIEAELKGIEDVTTMQELIRASEIVLARLQSLGVFESSKISLEPGPVELPNTANVVVDIVEAASRVSGEFGVYTKPATSSWTGEGTIKYKNLLGYGDLWDASLAYGANQATEVSVGLYAPRLKGTSNPVVARLSMLSQDWQEFSSYKEQLLGMSLGLISTKHHDLTYTFGWRTLTDPLQMASRSVRRQLGHGLLSSLKYTFKIDRRNSPIRPTKGLAFVSTTHLGGLTPDNRSLRFLRQEFDARYAVPFGFYNTALNLGISAGAIFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPMTLWGFKTRGLGPAEPRRQSRDVFNDDNSDSSKWDSIGGDLSVTAFADLSFDLPIRWLREHGVHGHVFAGAGNTAKLTQNEYKHFSPRRFLESFRTSVGCGFVVPTSLFRLEANYYYVLKQTEHDRGKNGFRFSFSAPS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05558 514 MobiDBLite consensus disorder prediction 389 404 - -
Mepo3g05558 514 Pfam Surface antigen variable number repeat 61 138 IPR010827 GO:0019867
Mepo3g05558 514 MobiDBLite consensus disorder prediction 386 406 - -
Mepo3g05558 514 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 53 511 IPR039910 -
Mepo3g05558 514 MobiDBLite consensus disorder prediction 18 32 - -
Mepo3g05558 514 FunFam Outer membrane OMP85 family protein 150 512 - -
Mepo3g05558 514 Gene3D membrane protein fhac 60 139 - -
Mepo3g05558 514 Pfam Omp85 superfamily domain 168 511 IPR000184 GO:0019867
Mepo3g05558 514 FunFam Outer membrane OMP85 family protein 60 139 - -
Mepo3g05558 514 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 153 512 - -
Mepo3g05558 514 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05558 Mepo-Chr3 69608006 69612338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05558 K07277 - gmx:100785408 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05558 3 69608006 69612338 Mepo3g05558 3 69608006 69612338 ECH
Mepo3g05558 3 69608006 69612338 Mepo7g02298 7 33853156 33859623 PCT