LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g05521	ATGAGGATGACAGTAGAACCAAGCTACTCACCAAGTTCAACAACTCCCAAAGAAGAACTTGAATGGCATCAATTACCAAAACACCCTCTCTTCTCCACAGCCACCACTCACGCCGTCGCTGGCAACTCCGTTTCACGAAACCTACTCGCTTATGACGGTGCCAACCGTCTCTATTTCTGGGACTCCAACAACAACCACCTCCACCGTCTTTCTCTTCGCCTCGGTGATCCTGATCCTACTTCCGTTCTCGCTGCTTCTCCTTCTAAGGTTTTGCAAACGGATATTGTGTTGGATTTTGAGGTGAATAGGATATCTATCAATAGGAATGGAACTGCGATGCTTCTTTTTGGGAATGAAAGACTCTGTGTTATGTATCTCTATGGACGTACTTCCAAGAAGGATGATGTTAACTTGATTTGCAGGACTATTAGTGTTGGTTCTCAAACACATCCGCTTGGAAACAATGATATTCGTGTATTGGAAGCCTCGTGGCACCCTTACAGTGATACCCATTTGGGAATCCTTTCTTCTGACTCAGTTTTTAGGCTTTTCAATCTGGCTGTGGATCTTTTGGAACCAGAGCAAGAATATTATTTACAGCCTGCAGGGCCTGGTAGATCCAGAAATGCCTCGTCAATGTGTCCAGTCGGTTTTTCTTTTGGGGGAGACCACTTGTGGGACAGGTTTAGTGTTTTTGTTGCATTCAGTGATGGGTCTATCTATGTAATTTGCCCTGTTGTTCCATTTGGAAGTCTCTTCCAATGTGAATCGTTATTAGAAATATACAATGACGCACATACATTTGGGCTAATGTCAACCAACTCTGTAGCGGCCAGTAATGCAACATATGCTATCTCATGGCTAGAAGCCACATTTCCCGAGTTACAGAACCAAGAAACTGAAGGAGACAGCTTATCTTTTTCAAGAGCTCGTGCTTATGCTGTATTTGACGCATCTCTGGTCTTGCTGGGACCTCTGCGAAGAGTAGGTCAGAGTGGAAATGAAGACTCAGTTGGTCGTAGTGCTGAATGTGAGGGTCGCGCAGTTAGTTTTCTCTACAATTCAGTCAGCAAAGACTCTATCTTGGTGACTGCCTGGAGTGGTGGACAATTACAGATAGATGCTCTAGCTGATGAGATCCAACCTGTCTGGAGTGTTGGCAGTCCACCTCGTCTTCGTCTTGATTCCCGCGACGAAATTCTTGGCCTTGCTATGATATGTGAGTCAATTGCCTGCAGCCATATGGAGAAGCTTGACCATAACGCCTGGTTGGGTAATCCGCCTCCTCTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGCGGTTATAATATTTCATTGTTCGTTGACACCCTTATGCCAGAGAGAATATATTCCCTTCACGATGGAGGGATTGACTCGATAGTGTTACATTTTCTTCCATTTACAAGTCAGACAAATGGAAAGGATGATACAATGAGGACACCTTCTGTGCATCCTGTTCTAAATACCTGCCAGAGTGGATCCGCTTCAGAGCCTTCACTTTGTGGTTTTGTGTCATTGTCAGATTCATTTGGATATTCCTGGATTGTAGCTGTTACACTTTCTCAAGAATGTGTTGTGCTTGAGATGAAAACTTGGGACCTCTTGCTTCCGTTAAGCATTGATATGGAAAAGAAAAACATTCAATCAGTTGGGCAATCAAATGAGAGAGATATACAACCAATAATTAGCAAAGAACTGCTTAGTGGGCCCAAGGAGGTACTTGTGCCTTGGGCCTCTCAAAGTTTACGTGCAGTTGCAGCTGATTCAATTGAAGGCCGGTCAACATTGCATCAGTATTTCAAGCTATTTCATGAAACTTACGTTGAATATGCACATAAGGTGCACCTGGAACTCAAGCATCATGCACCACAGTTGAAGAAAATCATTAATGACCAACATACTCGATTAGGTGATGCACATCAGAAACTTTTGAAAGTTGAGGAGAAAGAGCATATATTACAAAAAAGAGTTGATCGTGCAATTCAAATGCACAATTCTTTGGAAGAGCGCTTACAGCATTTAAGGAACTTACCTGGTGCTCACAAAAAGCCACTGTCCAAAGCAGAGCGACAGTTTAAGTCTGAACTTGACCACTTCAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGAGGCGGTAAGTGCAAGGCTGAGAAGGCACATGCATGCTTCAAAAGCTAGTCAGCAACAAAAGAAAATATCAGGGAAGAAAATTACTGCTGGGGATGATCAGATATCCATACTCAAATCTGCGCTTGAAAAACTTTCACTTGTAAATATTGAAAATTCAAAGAAAGTTAAGATTGTTGAGTCCTCATTGAATAACACAGAAAAAATCAGCGGAGAATCAAGTCTGCCTAGGCTTAAGAACTGTTAG	2418	0.4297	MRMTVEPSYSPSSTTPKEELEWHQLPKHPLFSTATTHAVAGNSVSRNLLAYDGANRLYFWDSNNNHLHRLSLRLGDPDPTSVLAASPSKVLQTDIVLDFEVNRISINRNGTAMLLFGNERLCVMYLYGRTSKKDDVNLICRTISVGSQTHPLGNNDIRVLEASWHPYSDTHLGILSSDSVFRLFNLAVDLLEPEQEYYLQPAGPGRSRNASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVICPVVPFGSLFQCESLLEIYNDAHTFGLMSTNSVAASNATYAISWLEATFPELQNQETEGDSLSFSRARAYAVFDASLVLLGPLRRVGQSGNEDSVGRSAECEGRAVSFLYNSVSKDSILVTAWSGGQLQIDALADEIQPVWSVGSPPRLRLDSRDEILGLAMICESIACSHMEKLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFVDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMRTPSVHPVLNTCQSGSASEPSLCGFVSLSDSFGYSWIVAVTLSQECVVLEMKTWDLLLPLSIDMEKKNIQSVGQSNERDIQPIISKELLSGPKEVLVPWASQSLRAVAADSIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIINDQHTRLGDAHQKLLKVEEKEHILQKRVDRAIQMHNSLEERLQHLRNLPGAHKKPLSKAERQFKSELDHFKEVELDALHSSVEAVSARLRRHMHASKASQQQKKISGKKITAGDDQISILKSALEKLSLVNIENSKKVKIVESSLNNTEKISGESSLPRLKNC	805

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g05521	805	SUPERFAMILY	WD40 repeat-like	41	243	IPR036322	GO:0005515
	Mepo3g05521	805	Coils	Coil	670	690	-	-
	Mepo3g05521	805	PANTHER	NUCLEOPORIN NUP84-RELATED	14	791	IPR037700	GO:0000055\|GO:0000056\|GO:0006913\|GO:0017056
	Mepo3g05521	805	Pfam	Nuclear pore component	449	783	IPR019321	-
	Mepo3g05521	805	Pfam	Nuclear pore component	24	189	IPR019321	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g05521	K14318		-	gmx:100801853	1291.17

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g05521	3	69181934	69192007	Mepo3g05521	3	69181934	69192007	ECH