Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05505 ATGGCGGAAGAAGATCGGAACGTGAGACTCAACGGCAACCGCATCATCGACGTAGTCTTAGACTGTGTAATCCCTTACATAACCGATCCAAAAGACCGTGACGCAGTTTCACAAGTCTGTCGACGATGGCACGAGCTAGATTCGATGACTCGAAAACACGTCACCATAGCTCTCTGTTACACCACAACACCGTGGCGGCTCCGTCGTAGATTTCCACATCTAGAGTCGTTGAAACTGAAAGGAAAACCGCGAGCAGCGATGTTTAATCTGATTCCTGAAGATTGGGGAGGTCATGTTACGCCATGGATTAACGAAATTTCTCAGTATTTTGATTGTTTAAAGAATCTTCATTTTCGGAGAATGATTGTTCAAGATTCCGATCTTAAAATTCTTGCTGAATCGCGTGGTCATGTTCTTCAGTCTCTTAAGCTTGAGAAGTGTTCTGGATTTTCTACAAAAGGTCTTGGATATATTGGTCGCTTTTGCAGGAGTTTAAGAGTTTTGCTTTTGGAGGAAAGCACAATTGTTGAGAATGTTGAAAATGATGAAGAAAATGAGAACGAATGGCTAAACGAGCTTGCCATGAATAACACGGTTCTCGAGTCTCTAAATTTTTACTTGACAGATGTTGAAGTCAAAGTTCAGGACCTCGAGCTTTTAGCCAGAAATTGCCCCAACTTGGTGTCGGTTAAGATTACTGATTGTGAAATTTTGGATCTTAGAAACTTTTTCCGCAATGCAACTGCTTTGGAAGAATTCTCTGGTGGCACCTACAATGAGGAACCTGAAAGATACACTGCTCTAATGTTACCGGCAAAGTTATGCCGATTGGGTCTAACATACATTGGAAAGAATGAATTGCCAATAGCGTTTCCGTATGCAGCTGCGCTAAAAAAATTGGATCTCCTCTATGCCATGCTAGACACAGAGGATCACTGTATGTTGATCCAAAAGTGCCCAAATTTGGAAGTCCTTGAGACGAGAAATGTTATTGGAGATAGAGGATTAGTGGTTCTTGGTCACTGTTGTAAGAAGTTAAAAAGACTTCGGATTGAACGAGGTGATGATGACCAAGGATTGGAGGATGAAGAAGGTACTGTGTCCCACAGAGGATTAATTGCTTTATCACAAGGGTGTACAGAACTTGAATATTTGGCTGTGTATGTGTCCGATATTACAAATGCATCTCTGGAACATATTGGCACACATTTGAAGAAACTTTGCGATTTTCGCCTTGTGTTGCTTGATCATGCAGAGAGAATATCAGATTTGCCGCTTGACAACGGGGTGCGGGCTTTGCTGATGGGGTGTGACAAGCTCATAAGATTTGCGTTATATCTGCGGCGTGGTGGCTTGACTGATGTTGGTCTTGGATACATTGGCCAACACAGTCAAAATGTGAGGTGGATGCTGTTAGGGTATGTGGGGGAAACTGATACAGGGCTTTTGGAGTTCTCAAAGGGCTGTCCTAGTCTTCAGAAGCTTGAAATGAGAGGATGTTCCTTTTTCAGCGAGCATGCGCTTGCTATTGCTGCAACACGATTGACTTCTCTTAGGTACTTGTGGGTTCAAGGGTATGGTGCATCTCCGTCTGGACGTGGTCTTTTGGCAATGGCTCGCCCCTTTTGGAACATTGAGTTAATTCCTTCTAGGCAAGTTGCTGTCAGTAACAATGTCAATGCGGATGAGCCTGAGGTTATTACGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGCCTGAGATCAGATTTTCCAAATTCTGTTGTACCATTGAACCCTGTTGCGTATGTTGATGCCTAG 1806 0.433 MAEEDRNVRLNGNRIIDVVLDCVIPYITDPKDRDAVSQVCRRWHELDSMTRKHVTIALCYTTTPWRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWINEISQYFDCLKNLHFRRMIVQDSDLKILAESRGHVLQSLKLEKCSGFSTKGLGYIGRFCRSLRVLLLEESTIVENVENDEENENEWLNELAMNNTVLESLNFYLTDVEVKVQDLELLARNCPNLVSVKITDCEILDLRNFFRNATALEEFSGGTYNEEPERYTALMLPAKLCRLGLTYIGKNELPIAFPYAAALKKLDLLYAMLDTEDHCMLIQKCPNLEVLETRNVIGDRGLVVLGHCCKKLKRLRIERGDDDQGLEDEEGTVSHRGLIALSQGCTELEYLAVYVSDITNASLEHIGTHLKKLCDFRLVLLDHAERISDLPLDNGVRALLMGCDKLIRFALYLRRGGLTDVGLGYIGQHSQNVRWMLLGYVGETDTGLLEFSKGCPSLQKLEMRGCSFFSEHALAIAATRLTSLRYLWVQGYGASPSGRGLLAMARPFWNIELIPSRQVAVSNNVNADEPEVITHPAHILAYYSLAGLRSDFPNSVVPLNPVAYVDA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05505 601 CDD F-box_AtTIR1-like 13 51 - -
Mepo3g05505 601 FunFam Coronatine-insensitive protein 1 52 596 - -
Mepo3g05505 601 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 31 253 - -
Mepo3g05505 601 Pfam F-box 14 53 IPR041567 -
Mepo3g05505 601 SUPERFAMILY RNI-like 90 407 - -
Mepo3g05505 601 Gene3D - 2 51 - -
Mepo3g05505 601 Gene3D Ribonuclease Inhibitor 52 596 IPR032675 -
Mepo3g05505 601 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Mepo3g05505 601 SMART LRR_CC_2 489 514 IPR006553 -
Mepo3g05505 601 SMART LRR_CC_2 136 161 IPR006553 -
Mepo3g05505 601 SMART LRR_CC_2 379 403 IPR006553 -
Mepo3g05505 601 SUPERFAMILY RNI-like 334 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05505 Mepo-Chr3 69004812 69007991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05505 K13463 - gmx:732662 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05505 3 69004812 69007991 Mepo3g05505 3 69004812 69007991 ECH
Mepo3g05505 3 69004812 69007991 Mepo7g02237 7 33042987 33047981 PCT