Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05490 ATGGTTCCATTCTCCTTCTTCCTCTTTTTCTCCTTAATCCTCTTTGTTCATTCTTCTTCCATTTCCAATAACCCAAATTTCGACCCTGACACTGATCTCTACGGCGATGCAAAGCTTTTCCCCGACAAAACAGGAGGTGGGTCCCACGTCAAACTCACCCACCACTCTTCTCTCACCGCCGGCCTCCTCCTCCGCCGTCACCCTCTCACATTCACCGATCCCATCTCCTTCTCCGTTCAATTCACCTTCTCCATTTCCCATGACGCCGGCGATGGTCTAATCCTTATTCTCATCCCCGGCGATCTTGCCGCCGCATTCCCCGGTAATGGCTCATATGGTCTTGGCTTCTCTCCTCCTACTCCGACGAACAGCTACCTCGGCGTCGAATTCGATACCTCGAAGGATGATAATGTTGGTGATCTGAATGCTAATCATGTTGGTATTAATCTAGGAAGTCTTGTATCTGCTGCTGTTGCAAATGTTTCGAAATCGAATTTGGTTTTGAATAGTGGTGAAAAGTTGAAATCTTGGGTTGATTATGATAACGGGTTACATAGATTGGAAGTTAGGTTAAGCAAATTGAATGAAGCTAAATCTGAGAAACCAATTGTTTCACATAATATTGATTTGTTTAAGATTTGGGGTAATCAACCTATTTTTTTGGGTTTGAGTTCTTCCAATGATGCACATTCTGTTCAGGTTGTTCGTGTTTATTCATGGAAGGTTAATTTGAAGAATGCTACAAATTCAAATTCAGATTTAAATTCATTGCATTCTCAACCTGTTAATCCTAATGATGGACAAGAACAATCGAAGCTTGATGCCGCGAATAGAAGAAAGTATCGTCCTTTGACGTTTCTAGCCGGTGTGATTTTTGGAACGGTTTGTGTTGTATTGGTGACATTTGTGGTTTTGTTTATGTGGGTGATTTTCTTTCATAAGCATGAAGAAGAGTCTCTTGCTAAATTACCTGAACATCCTTCTCATGTAAGGTATGAAAGGATTGATGTTGCTGTTGAAGATCATGATGAACAACATTAG 1041 0.415 MVPFSFFLFFSLILFVHSSSISNNPNFDPDTDLYGDAKLFPDKTGGGSHVKLTHHSSLTAGLLLRRHPLTFTDPISFSVQFTFSISHDAGDGLILILIPGDLAAAFPGNGSYGLGFSPPTPTNSYLGVEFDTSKDDNVGDLNANHVGINLGSLVSAAVANVSKSNLVLNSGEKLKSWVDYDNGLHRLEVRLSKLNEAKSEKPIVSHNIDLFKIWGNQPIFLGLSSSNDAHSVQVVRVYSWKVNLKNATNSNSDLNSLHSQPVNPNDGQEQSKLDAANRRKYRPLTFLAGVIFGTVCVVLVTFVVLFMWVIFFHKHEEESLAKLPEHPSHVRYERIDVAVEDHDEQH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05490 346 Pfam Legume lectin domain 26 253 IPR001220 GO:0030246
Mepo3g05490 346 CDD lectin_legume_LecRK_Arcelin_ConA 23 240 IPR001220 GO:0030246
Mepo3g05490 346 MobiDBLite consensus disorder prediction 251 272 - -
Mepo3g05490 346 Gene3D - 17 246 - -
Mepo3g05490 346 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 244 IPR013320 -
Mepo3g05490 346 MobiDBLite consensus disorder prediction 251 271 - -
Mepo3g05490 346 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 9 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05490 Mepo-Chr3 68861184 68862691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05490 59 314 Receptor kinase-like Gene Family AT5G55830 29.412 1.26e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05490 - - tpra:123898370 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05490 3 68861184 68862691 Mepo3g05490 3 68861184 68862691 ECH