Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g05462 | ATGAATGGTGAAGGGTGTGAAATGAAGGAGAAAATGGTTTACATGTGGGGCTATTTACCAGGAGCTTTGCCGCAAAGGACGCCGTTATTGACGCCGGTACTTGTTAGGGTTCCGGCGTCGTCTGCTGGTTATAACTGGAAGGATGTTTCTGGTGGTGGTTGTGGATTTGCCATGGCTATATCTGAATCGGGAAAGCTTATAACATGGGGTTCGACAGATGATCTAGGCCAAAGTTATGTGACATCGGGCAAGCACGGGGAAACTCCAGAGCCTTTCCCTCTTCCAAATGAAGTGTCTATTGTAAAAGCTGCTTCTGCATGGGCACATTGTGTTGCTGCGACGGATTGTGGAGAAGTTTACACATGGGGATGGAAGGAATGTATTCCTTCTGGGAAGGTATTTGGTGAAACTTCGCAAGGGGTAAGTCCTGAAAAAGATGCACAAGGAAAGCAGAGTTCATTCTTGACAGAACAAGTGAGCTCTCGTTCTCAAGTCTCAAAATCCACAGGAGGAACTGTTTCAAGTGGAGAAGAAAGTACCAAGAGAAGGAAAGTATCTTCTTCAGCAAAGCAAGCGGCTCAAACCTCATCATCTGGTGATGATATTCTAACAGCAATGCCATGTCTTGTCACACTAAATCCAGGGGTAAAGATAACAAGTGTTGCTGCCGGTGGGCGTCATACCCTAGTATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGCTCCAGAGTACGTATGGTGTCCTCTCCTCATATTATTCCTTGCATTGATTCCTCTTCACTGGTTCAGGGAAGCATGAGTTCAGAAGGACACAATTTTAGGACTCCTGGAAGTTGTATAAAGGCTATTGCCTGTGGTGGTCGACATAGTGCAGTAATCACAGATGCTGGAGCTGTGCTTGCGTTTGGTTGGGGACTTTATGGACAGTGCGGACAAGGAAGCACCGACGATGAACTAAGTCCAACCTGCGTATCTTCCTTATTGGGCATTCAAATAGAGGGAATTGCTGCCGGTTTGTGGCATACTGTCTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGGAACCAGTTTGGGCAGCTGGGAACTGGTTCTGATCAAGCTGAGACTCTACCAAGACTGCTGGATTGTCCGAGCTTGGAAAATGTGAATGTAAAGACCATATCTTGTGGGGCTCGTCACACTGCTCTAGTAACAGATAATGGAAAAGTCTTCAGCTGGGGATGGAACAAATATGGACAGCTCGGCCTTGGGGACGTGATTGACCGAAACATTCCATCTGAAGTCGCAATAGAAGGTTGTGTAGCTAAAAACGTTGCATGTGGTTGGTGGCACACTCTTCTTTTGGCTGAGTCACCGACTTGA | 1398 | 0.4692 | MNGEGCEMKEKMVYMWGYLPGALPQRTPLLTPVLVRVPASSAGYNWKDVSGGGCGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKQSSFLTEQVSSRSQVSKSTGGTVSSGEESTKRRKVSSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEGHNFRTPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEVAIEGCVAKNVACGWWHTLLLAESPT | 465 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g05462 | 465 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 235 | 306 | IPR000408 | - | |
| Mepo3g05462 | 465 | MobiDBLite | consensus disorder prediction | 136 | 198 | - | - | |
| Mepo3g05462 | 465 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 55 | 461 | - | - | |
| Mepo3g05462 | 465 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 358 | 408 | IPR000408 | - | |
| Mepo3g05462 | 465 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 412 | 460 | IPR000408 | - | |
| Mepo3g05462 | 465 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 235 | 303 | IPR000408 | - | |
| Mepo3g05462 | 465 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 307 | 354 | IPR000408 | - | |
| Mepo3g05462 | 465 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 307 | 358 | IPR000408 | - | |
| Mepo3g05462 | 465 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 293 | 303 | IPR000408 | - | |
| Mepo3g05462 | 465 | Gene3D | - | 133 | 465 | IPR009091 | - | |
| Mepo3g05462 | 465 | MobiDBLite | consensus disorder prediction | 136 | 176 | - | - | |
| Mepo3g05462 | 465 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 359 | 412 | IPR000408 | - | |
| Mepo3g05462 | 465 | Gene3D | - | 8 | 132 | IPR009091 | - | |
| Mepo3g05462 | 465 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 399 | 409 | IPR000408 | - | |
| Mepo3g05462 | 465 | PRINTS | Chromosome condensation regulator RCC1 signature | 237 | 251 | IPR000408 | - | |
| Mepo3g05462 | 465 | PRINTS | Chromosome condensation regulator RCC1 signature | 408 | 429 | IPR000408 | - | |
| Mepo3g05462 | 465 | PRINTS | Chromosome condensation regulator RCC1 signature | 348 | 366 | IPR000408 | - | |
| Mepo3g05462 | 465 | PRINTS | Chromosome condensation regulator RCC1 signature | 100 | 113 | IPR000408 | - | |
| Mepo3g05462 | 465 | PRINTS | Chromosome condensation regulator RCC1 signature | 221 | 237 | IPR000408 | - | |
| Mepo3g05462 | 465 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 64 | 116 | IPR000408 | - | |
| Mepo3g05462 | 465 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 221 | 231 | IPR000408 | - | |
| Mepo3g05462 | 465 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 413 | 463 | IPR000408 | - | |
| Mepo3g05462 | 465 | SUPERFAMILY | RCC1/BLIP-II | 13 | 463 | IPR009091 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g05462 | Mepo-Chr3 | 68368370 | 68374636 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g05462 | - | - | gmx:100778841 | 789.645 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo3g05462 | 3 | 68368370 | 68374636 | Mepo3g05462 | 3 | 68368370 | 68374636 | ECH |