Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05450 ATGAATCAAGACCGGATGGAATCTTGTCATGATCATCTTAAAATAACAAGATTACCTTATATACCAGAAAAAATAGGTGACTTGGTTTCATTCTCAATAAGAGTTGGCATAATTATCTGCCTTATAGCATCGATATCACTTGCTATCCATTCAACATTCGCTAAACCAGACCAATGGTTTCCATTACCGGAGCATTTACATGTTATACAGAATGTTTCGGTCATTACCATTGACACAATACCTACAAACATCTCACATATTGTATTCGGCATTGCTGGTTCATCGAAAATGTGGCATAGCCGTAGTAACTACAGCAAGCTTTGGTGGAATCCAACTGCTTGCAGAGGTTTTGTCTGGTTTGACAAGAAACCAAAGAATTTGAAGCCGGACGATATGCTAATTCCATATAAAATCTCACAGGGATGGACTAAGTTCAGGTACTTGCACTCTGCGTCCGCAGTTCGGATATCGCGGATAGTTTACGAAAGCTTTAGACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGCGATGATGATACCGTGTTTTTCCCAGAGAATTTAGTTACTGTGTTGGGAAAATATGATCACAATCAATTGTATTATATTGGTGGGAATTCTGAGAGTGTGGAACAAGATGTTATGCATTCTTATGATATGGCTTTTGGTGGTGGTGGCATTGCAATCAGTTATGCATTAGCAGCCAAACTAGTCAATATTATGGATTCTTGTCTTCATAGATACTTTTATTTTTATGGTTCTGATCAAAGAATTTGGGCCTGTGTAAACGAATTAGGAGTATCTCTTACCAGAGAAAGAGGATTCCATCAGCTTGACATTAGAGGGAATCCATATGGTCTTTTAGCCGCGCACCCTCTGGCACCGCTTGTGTCACTCCATCACCTTGATCAATTGAACCCGGTGTTTCCGGACCAAAGTCAAATGTCTTCATTAAAAAAACTCATCAGTGCATACGACCTTGACCCTGCAAGGATAGTGCAGCAAAGTGTTTGTTATGATCATAGGCAAAGATGGTCGATATCTATTTCTTGGGGCTACACAATACAAATTTATTCATCATTGTTGATACCAGCGGATTTGCAGATGCCATTGCAGACGTTTAAAACATGGCGAAGTTGGAGTGATGGTCCTTTCACGTTTAATACTCGATGGATGAACCCTGACGTGTGCCAGCAGCCATCTATATTTTTCCTGGATCAGGTTAGCAAGGTACCACGTAGGCAATGCTGCAACTTTATGGATGGAGGAAGCATAAAGGATGGAAGTGTGCATATCAGAATAAGGAAGTGCAGACCTCAAGAAACAATTACTATTTAG 1338 0.4013 MNQDRMESCHDHLKITRLPYIPEKIGDLVSFSIRVGIIICLIASISLAIHSTFAKPDQWFPLPEHLHVIQNVSVITIDTIPTNISHIVFGIAGSSKMWHSRSNYSKLWWNPTACRGFVWFDKKPKNLKPDDMLIPYKISQGWTKFRYLHSASAVRISRIVYESFRLGLPNVRWFVMGDDDTVFFPENLVTVLGKYDHNQLYYIGGNSESVEQDVMHSYDMAFGGGGIAISYALAAKLVNIMDSCLHRYFYFYGSDQRIWACVNELGVSLTRERGFHQLDIRGNPYGLLAAHPLAPLVSLHHLDQLNPVFPDQSQMSSLKKLISAYDLDPARIVQQSVCYDHRQRWSISISWGYTIQIYSSLLIPADLQMPLQTFKTWRSWSDGPFTFNTRWMNPDVCQQPSIFFLDQVSKVPRRQCCNFMDGGSIKDGSVHIRIRKCRPQETITI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05450 445 Gene3D - 78 339 - -
Mepo3g05450 445 Pfam Protein of unknown function, DUF604 212 413 IPR006740 -
Mepo3g05450 445 FunFam Fringe-related protein-like 75 326 - -
Mepo3g05450 445 PANTHER FRINGE-RELATED 37 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05450 Mepo-Chr3 68250711 68252737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05450 10 443 Glycosyltransferase AT3G11420 50.202 2.81e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05450 - - gmx:100802549 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05450 3 68250711 68252737 Mepo3g05450 3 68250711 68252737 ECH
Mepo3g05450 3 68250711 68252737 Mepo3g01614 3 23992573 23994882 ECH