Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05448 ATGGCGAACGCAGAGAGCAGTAGCAGAAGCTCAAGATGGTCTCTCAAGGGATTCACAGCTCTCGTCACCGGCGGAACGCGTGGAATCGGACATGCTATCGTGGAAGAACTCGCTGAGTTTGGTGCCACAGTCTACACTTGTTCTAGAAACCAAGAGGAGCTTAATAAACGCTTAAACGAGTGGAAAGAGAAAGGTTTTTCTGTTTATGGATCTGTTTGTGATGCATCTTCTTCTTCTCAAAGAGAGGAGCTTATTCAAAATGTGGCTTCTTCTTTCAACGGCAAACTCAACATATTTGTGAACAATGCTGGAACAAATGTGAGGAAGCCAACAATTGAGTATACTGCTGAAGATTATTCGAAAGTGATGACTACTAACTTGGATTCTGCATATCATCTATGTCAATTGGTACATCCTCTTCTTAAAGAATCTGGAAATGGAAGTATTGTGTTCATTTCATCTGTTGCATCTCTGACAAGCATAGGTTCTGGAAGCGTCTATGCAGCGAGTAAAGCTGCAATCAATCAGCTGACAAAAAATCTTGCTTGTGAATGGGCGAAAGACAATATAAGGAGCAATTGTGTTGCGCCTTGGTATACAAAAACACCACTTGTGGAACATCTAATTGCTAACGAAGAGTTTGTGAATCAAGTACTATCTCGAACACCGATAAAGCGTATAGCAGAAACACATGAAGTGTCTTCCTTGGTGACTTTCCTTTGCCTGCCAGCTGCTTCATACATCACTGGACAGATTGTTTCTGTTGATGGAGGGTTTACTGTGAATGGATTTCAACCCAGCATGAGGATTACCTAA 816 0.4191 MANAESSSRSSRWSLKGFTALVTGGTRGIGHAIVEELAEFGATVYTCSRNQEELNKRLNEWKEKGFSVYGSVCDASSSSQREELIQNVASSFNGKLNIFVNNAGTNVRKPTIEYTAEDYSKVMTTNLDSAYHLCQLVHPLLKESGNGSIVFISSVASLTSIGSGSVYAASKAAINQLTKNLACEWAKDNIRSNCVAPWYTKTPLVEHLIANEEFVNQVLSRTPIKRIAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTVNGFQPSMRIT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05448 271 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Mepo3g05448 271 FunFam Short-chain dehydrogenase reductase 4 265 - -
Mepo3g05448 271 Gene3D - 8 263 - -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Mepo3g05448 271 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Mepo3g05448 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Mepo3g05448 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Mepo3g05448 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Mepo3g05448 271 PANTHER TROPINONE REDUCTASE 12 263 IPR045000 GO:0016491
Mepo3g05448 271 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Mepo3g05448 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 262 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05448 Mepo-Chr3 68213409 68216323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05448 12 266 Miscellaneous Gene Families AT2G29290 59.922 1.06e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05448 K08081 - gmx:100819646 441.81