Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05444 ATGGCTGCTTCAGTTTCAACTGTTGGAGCTGTCAAAACTCCAATGAGCTTGAATGGCTCAGTAGTAGCTGGACCAACAGTTTCAAATTCAGCTTTCTTCGGCACAAGCTTGAAGAAGCTTACCGCAAGACTTCCAAACACAAAAGTTTCCTCAGGAAGCTTCAAAGTTTTTGCTGCTAAAGAGATCGATGAGGGTAAACAGACCGACGGTGACAGATGGAGGGGTTTGGCCTATGATATTTCAGATGACCAACAAGACATCACAAGAGGAAAGGGTATGGTTGATTCAGTTTTCCAAGCACCACAAGATACTGGAACTCATTATGCAGTCATGAGTTCTTATGAGTACCTTAGTACTGGACTTAAACAGTACAACTTTGACAACACTATGGATGGATTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACTAAGAATTTCTTGACCCTACCCAACATCAAGGTTCCTCTCATTCTTGGAGTCTGGGGAGGAAAAGGACAGGGAAAATCTTTCCAAGCTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTTGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGACAGAGATACCGTGAAGCCTCTGACATTATCAGGAAGGGAAAGATGTGTTGTCTGTTCATCAACGATCTCGATGCAGGAGCAGGTCGTATGGGTGGAACCACACAATACACTGTCAACAACCAGATGGTGAATGCCACACTCATGAACATTGCTGATAACCCCACCAATGTCCAACTCCCTGGTATGTACAACAAGGAAGACAACGCTCGTGTGCCCATCATTGTCACCGGTAACGATTTCTCAACACTTTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCTACAAGAGAAGACCGTATTGGTGTCTGCGTTGGAATTTTCCGCCATGACAATATCGCAAAGGATGACATTGTCAAGATTGTTGACACCTTCCCTGGCCAATCCATCGATTTCTTTGGTGCATTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAAGTGGGTTTCTGGAGTTGGTATTGAAACAATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGACCACCAGTGTTTGAGCAGCCAAAGATGACACTAGAAAAGCTATTGGAGTATGGTAACATGCTTGTCTCAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCAGACAAGTATTTGGAAGGTGCTGCTCTTGGTGATGCTAATCAAGATGCTATTAAGGAGGGAAAATTCTAG 1314 0.4429 MAASVSTVGAVKTPMSLNGSVVAGPTVSNSAFFGTSLKKLTARLPNTKVSSGSFKVFAAKEIDEGKQTDGDRWRGLAYDISDDQQDITRGKGMVDSVFQAPQDTGTHYAVMSSYEYLSTGLKQYNFDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCVGIFRHDNIAKDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGIETIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVSEQENVKRVQLADKYLEGAALGDANQDAIKEGKF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05444 437 Gene3D - 310 422 - -
Mepo3g05444 437 PANTHER - 22 427 IPR044960 -
Mepo3g05444 437 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Mepo3g05444 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 336 IPR027417 -
Mepo3g05444 437 Gene3D - 125 309 IPR027417 -
Mepo3g05444 437 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 125 309 - -
Mepo3g05444 437 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 310 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05444 Mepo-Chr3 68170469 68174254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05444 - - psat:127083843 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05444 3 68170469 68174254 Mepo3g05444 3 68170469 68174254 ECH