Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05441 ATGACTACTTCCTTGATTTTCTTCTGCTTTCTACTCTCCATCTCTGTCACAGTCTCAGGTGTTGTTACGGATGGAAACGGGACACAACTCATACTTGTAAACAACTGCAAAGAGAGTGTATGGTCAGGAATTCTTAGCAACGAAGGACACCCTACAATCAAAGACGGCGGATTTCACCTTCCAAGCGGCGAAGAAATTGTCCTCCAACTCCCTAATCACTGGGCAGGAAGAATCTGGGGCAGACAAGGCTGTTTCTTCCACGAAACAACAGGAAAAGGCACATGTCAAACCGGAGACTGCGGAGGCCAACTGAAATGTAAGGGAATTGGTGGTGTTCCTCCAGCTACACTTGTTGAAATGACACTCGGAACCTCACATTCACCTTTGCATTACTATGATGTTAGTTTGGTTGACGGTTTTAACCTTCCAATGTCAATGAAACCTATTGGTGGTGGTGTTGGTGGTGGTGTTGGTGGTGGTGTTGGTTGTGGCATTGCTTCTTGTCAAGCTGATTTGAATGGTTGTTGTCCCTCTCAACTTGTTGTGAAGCATAATGGGAAAGTTGTGGGGTGTAAAAGTGCTTGTTTGGCTACAAAATCAGATAAGTATTGTTGCACTGGTGAATTTGCTGATCCAAAGATTTGCAAGCCTACTATGTTTGCTCGTGTTTTTAAGAGTGTTTGTCCTCGTGCTTATAGCTATGCTTATGATGATGCAACTGGGCTTATGTCTTGTTTGGCAAATCGTTATGCCATTACATTTTGCCCTCCATGA 774 0.4393 MTTSLIFFCFLLSISVTVSGVVTDGNGTQLILVNNCKESVWSGILSNEGHPTIKDGGFHLPSGEEIVLQLPNHWAGRIWGRQGCFFHETTGKGTCQTGDCGGQLKCKGIGGVPPATLVEMTLGTSHSPLHYYDVSLVDGFNLPMSMKPIGGGVGGGVGGGVGCGIASCQADLNGCCPSQLVVKHNGKVVGCKSACLATKSDKYCCTGEFADPKICKPTMFARVFKSVCPRAYSYAYDDATGLMSCLANRYAITFCPP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05441 257 ProSitePatterns Thaumatin family signature. 91 106 IPR017949 -
Mepo3g05441 257 FunFam Thaumatin-like protein 1a 28 256 - -
Mepo3g05441 257 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mepo3g05441 257 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Mepo3g05441 257 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Mepo3g05441 257 SMART tha2 30 256 IPR001938 -
Mepo3g05441 257 SUPERFAMILY Osmotin, thaumatin-like protein 29 257 IPR037176 -
Mepo3g05441 257 Gene3D Thaumatin 29 256 IPR037176 -
Mepo3g05441 257 CDD TLP-PA 29 255 - -
Mepo3g05441 257 PIRSF PR5 1 257 IPR001938 -
Mepo3g05441 257 ProSiteProfiles Thaumatin family profile. 30 257 IPR001938 -
Mepo3g05441 257 Pfam Thaumatin family 34 256 IPR001938 -
Mepo3g05441 257 PANTHER OS03G0233200 PROTEIN 16 256 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05441 Mepo-Chr3 68155757 68156889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05441 10 256 Receptor kinase-like Gene Family AT5G38280 37.698 8.80e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05441 - - gmx:100809093 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05441 3 68155757 68156889 Mepo3g05441 3 68155757 68156889 ECH