Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05439 ATGAACACAAAAACCTCTCCCCATGTTCTTCTTGTTCCTCCTATAACAATTATCCTTTACATTTTCATGATGTTCCTACAAATCCAAACAAGTACTACTTCTTCTCTCTCATCTCCACTACAAAAACCTTTCATATTGCCTTTAAAAGTACAAACACAACCACATGGCACAATTTCACTACCAAAACCTTCTTCACATAAACTCTCTTTCCAACATAATGTAACATTAACAGTTTCACTAACACTAGGCTCACCCCCACAGAATGTTACCATGGTCCTCGACACAGGGAGTGAACTCTCATGGCTTCATTGCAAAAAACTTCCAAATTTAAACTTCATTTTCAACCCCCTCCTTTCTTCTTCTTACACCCCCACTCCATGCACATCACCCATTTGCATAACCCGAACCAGAGACTTCCCCGTACCCGTTCAATGCGACCCGAAGAAACTCTGCCACGCTACAATCACCTATGCTGACTCCACCTACATCGAAGGCAACCTCGCCACGGAGACATTCTTCGCCGGTGGGTCAGCCCAACCCGGAACAATATTCGGGTGTATGGATTCCGGGTTCAGCTCAAATTCAAACGAAGACTCTAAAACAACCGGGTTAATGGGTATGAACCGTGGGTCTCTCTCATTTGTAACCCAAATGGGATTACCCAAATTCTCATATTGCATCTCCGGCAAAGACTCTACCGGCGTGTTGCTTTTCGGCGACGCGAATATCAATTGGGTCGGGCCATTGAAATATACACCAATGGTAAAAATCACAACCCCATTACCGTATTTCGATCGAGTCGCATACACAGTGCGACTCGAGGGAATACGGGTCGGGAAGAAGATGCTCCAATTACCCAAAACAATATTTGCACCTGATCATACCGGTGCGGGTCAGACAATGGTAGATTCGGGTACACAGTTCACGTTTCTTTTAGGACCGGTTTACACTGCTTTGAGACAAGAATTTGTAGAACAAACAAAAGGGGTGTTGACCCTCTTGGAAGACGCGAATTTTGTCTTCCAAGGTGCTATGGATTTGTGTTACCGTATCGGGTCGGGTTCGGGTCTCCCGCCGTTACCCGCGGTGACACTAGTGTTTGAAGGAGCGGAGATGAGTGTTTCAGGGGAGAGACTATTGTATAGAGTAGCTGACGTGGCATTAAAAGGGAATAATAATGATTTGGTATATTGTTTCACGTTTGGAAATTCAGATTTGTTGGGAATTGAGGCATATATTATTGGACATTATCATCAAATGAATGTGTGGATGGAGTTTGATTTAGTCAACTCTAGAGTTGGATTTGCTGATACAAAATGTGAACTTGCAAGTCAACGACTAGGTATGTAG 1350 0.4378 MNTKTSPHVLLVPPITIILYIFMMFLQIQTSTTSSLSSPLQKPFILPLKVQTQPHGTISLPKPSSHKLSFQHNVTLTVSLTLGSPPQNVTMVLDTGSELSWLHCKKLPNLNFIFNPLLSSSYTPTPCTSPICITRTRDFPVPVQCDPKKLCHATITYADSTYIEGNLATETFFAGGSAQPGTIFGCMDSGFSSNSNEDSKTTGLMGMNRGSLSFVTQMGLPKFSYCISGKDSTGVLLFGDANINWVGPLKYTPMVKITTPLPYFDRVAYTVRLEGIRVGKKMLQLPKTIFAPDHTGAGQTMVDSGTQFTFLLGPVYTALRQEFVEQTKGVLTLLEDANFVFQGAMDLCYRIGSGSGLPPLPAVTLVFEGAEMSVSGERLLYRVADVALKGNNNDLVYCFTFGNSDLLGIEAYIIGHYHQMNVWMEFDLVNSRVGFADTKCELASQRLGM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05439 449 Pfam Xylanase inhibitor N-terminal 78 240 IPR032861 -
Mepo3g05439 449 ProSiteProfiles Peptidase family A1 domain profile. 76 436 IPR033121 -
Mepo3g05439 449 Gene3D Acid Proteases 243 445 IPR021109 -
Mepo3g05439 449 CDD pepsin_A_like_plant 75 440 IPR034161 -
Mepo3g05439 449 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 91 102 IPR001969 GO:0004190|GO:0006508
Mepo3g05439 449 Gene3D Acid Proteases 68 239 IPR021109 -
Mepo3g05439 449 FunFam Aspartic proteinase PCS1 244 444 - -
Mepo3g05439 449 FunFam Aspartic proteinase PCS1 67 240 - -
Mepo3g05439 449 PANTHER ASPARTYL PROTEASE-RELATED 23 440 IPR001461 GO:0004190|GO:0006508
Mepo3g05439 449 Pfam Xylanase inhibitor C-terminal 268 436 IPR032799 -
Mepo3g05439 449 SUPERFAMILY Acid proteases 77 440 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05439 Mepo-Chr3 68134228 68136324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05439 77 255 Miscellaneous Gene Families AT1G44130 30.570 4.04e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05439 - - gmx:100783835 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05439 3 68134228 68136324 Mepo3g05439 3 68134228 68136324 ECH