Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05434 ATGCCTTTCATCTCCAAAATCCAACGCCAATCCGATTACAATCGCTTCAGTTCCGCCACTCCCATCGTTATCGACAATGGCGCTTCCTATTTCCGTATTGGATGGGCTGGTGAGTCTGAACCTCGTGTTGTTTTTCGCAACATTGTTCAACGGCCGCGACATAAAGCCACAGGAGAAACTGTTACCATTGTTGGTGACCATGATCCAGCATTGTTGAAGTACTTTGATTGTACTCGCTCAGGACCACGATCAGCATTCGAAAGCGATGTTGTTTTTCAGTTTGAAATAATGGAATATATTCTGGACTTTGCTTTTGATCGAATGGGTGCAACAGGATCAGGGATTGATCATCCTATCCTGATCACAGAATGTGTATGCAACCCAGTTCAATCTCGAAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGCCTTTGGTGTTGACGCAGCATTCAGCTATAAATATAACCAACAACGAAGTGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTCGCTACAACCCACGTGATTCCGTTTGTTGACGGGGAACCTATTTATAAAGGAAGCTGTCGCACTAATATTGGTGGATTCCATGTGACTGATTATTTTCAGCGACTTCTTTCACTTAAATATCCTTATCATATGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATGTTGCACAGGACTATGTTTCAGAAGCTCGATTGTTTCTGAAAGGAGCTAAGGAGGCCGAAGAAAAAACCAAAATGTGGCAGCTCCCTTGGGTGCCACCTCCAGTTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAGGGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCGAAGAGGTCATCAAAAATAAATGAGCTGGAAAATGAATTACGTGGTTTGGAATTTCTTTTGAATCAACTTGGACATGTTCAAGAGAGTGATGTACGATCGTTCTTAGCAGAGACTGGCTATGTCTCTAGGCAGGAAGTAGAATCTGCCCGTAGTAAAGTTGTGCAGTCCTTGCGGAAACAAAAAGGTGAGCAAACTGAAATTGAAAAACCTGACGCTGCGTCTAATGAGAAGTATACGCTTATAAACATCCCTGATGACATGCTGACGGCAGAGCAGCTTGTTGAAAAGAGGAAACAGCTATCAATTAAATCTATGTCTGATGGGAGGCAGCGATTAAAACAGAAGCGCTATGAAGAGGAATTGGAAAGGGAGAGGAAACAACAGCTAGAGGAGGAGAGACGCCTGGAGAACCCAGAGCTTTACTTGGAACAATTGCGTGCCAAATACAAGGACCTTTCGGAGAAAATTGGCCAACGTAAACGGCTCAAAACAAATGGAGGCTCCTCCACGAATGGAAATGGAAATAGTTTGACAGGTAGTGTTGGTCGTGGTGAGAGACTCAGTGCTGCTCAAAGGGAGAGAATGCGCCTCCTGACAACTGCTGCCTTTGATCGTGGTAAGGGCGAGGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATAATGATGACGACGACGATGAACCAGATGAGGATAACACAGAGCTTGCCCGCATCTCTTCAAGGCTCCAGGACTTGGATCCATCATTTGTGCCCAAGGTAGAAAGTAGCTCCCAACCTGCTGAGGCGCCACGCGTTCGTCCGGTCACCAAAGAAGATTTTCAGATTGTTTTCGGAGTTGAAAGGTTTAGGTGCCCTGAAATTTTGTTCAGTCCAAACTGGATTGGAGTTGATCAGGTGGGGTTAGATGAGATGGCCGGGGTCTCAATGAGAAGGTTATCATGTAAGGACGAAAAGCTGGAACAGAGAATGACTAATTCCATACTTGTGACTGGTGGAAGCTCTCTTTTCCCTGGCATCATTGAACGCCTGGAAGCTGGAATTCGGATGATTAGGCCCTGCGGTTCGCCTATAAAAATAGTTAGAGCACTTGATCCAGTTATGGATGCATGGCGTGGTGCGTCTGCTTATGCATCAGCCCCAGGTTTTCACACACAAACATTCACTAGGATGGATTATTATGAAAAAGGTGAAGATTGGCTTCGTAATTATCAACTGAAATATTCGTTGTAA 2163 0.4424 MPFISKIQRQSDYNRFSSATPIVIDNGASYFRIGWAGESEPRVVFRNIVQRPRHKATGETVTIVGDHDPALLKYFDCTRSGPRSAFESDVVFQFEIMEYILDFAFDRMGATGSGIDHPILITECVCNPVQSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQQRSVCDKDGLAMCPGFATTHVIPFVDGEPIYKGSCRTNIGGFHVTDYFQRLLSLKYPYHMARFTWEKVEDLKMEHCYVAQDYVSEARLFLKGAKEAEEKTKMWQLPWVPPPVEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSKINELENELRGLEFLLNQLGHVQESDVRSFLAETGYVSRQEVESARSKVVQSLRKQKGEQTEIEKPDAASNEKYTLINIPDDMLTAEQLVEKRKQLSIKSMSDGRQRLKQKRYEEELERERKQQLEEERRLENPELYLEQLRAKYKDLSEKIGQRKRLKTNGGSSTNGNGNSLTGSVGRGERLSAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDDEPDEDNTELARISSRLQDLDPSFVPKVESSSQPAEAPRVRPVTKEDFQIVFGVERFRCPEILFSPNWIGVDQVGLDEMAGVSMRRLSCKDEKLEQRMTNSILVTGGSSLFPGIIERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGASAYASAPGFHTQTFTRMDYYEKGEDWLRNYQLKYSL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05434 720 SUPERFAMILY Actin-like ATPase domain 19 161 IPR043129 -
Mepo3g05434 720 MobiDBLite consensus disorder prediction 465 485 - -
Mepo3g05434 720 Gene3D Actin; Chain A, domain 4 203 263 - -
Mepo3g05434 720 SMART actin_3 19 717 IPR004000 -
Mepo3g05434 720 FunFam ARP5 actin-related protein 5 homolog 610 679 - -
Mepo3g05434 720 FunFam Putative actin-related protein 5 680 708 - -
Mepo3g05434 720 PANTHER ACTIN 21 708 IPR004000 -
Mepo3g05434 720 Coils Coil 445 465 - -
Mepo3g05434 720 MobiDBLite consensus disorder prediction 459 491 - -
Mepo3g05434 720 FunFam Actin-related protein 5 18 170 - -
Mepo3g05434 720 Gene3D - 610 679 - -
Mepo3g05434 720 FunFam Actin-related protein 5 171 202 - -
Mepo3g05434 720 Gene3D - 176 202 - -
Mepo3g05434 720 Gene3D Actin; Chain A, domain 4 523 609 - -
Mepo3g05434 720 FunFam Actin-related protein 5 203 257 - -
Mepo3g05434 720 Gene3D - 680 708 - -
Mepo3g05434 720 Pfam Actin 585 712 IPR004000 -
Mepo3g05434 720 Pfam Actin 19 268 IPR004000 -
Mepo3g05434 720 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Mepo3g05434 720 Coils Coil 415 437 - -
Mepo3g05434 720 SUPERFAMILY Actin-like ATPase domain 170 713 IPR043129 -
Mepo3g05434 720 Coils Coil 309 329 - -
Mepo3g05434 720 Gene3D - 18 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05434 Mepo-Chr3 68064166 68070313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05434 586 707 Miscellaneous Gene Families AT3G53750 32.787 1.28e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05434 K11672 - gmx:100808396 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05434 3 68064166 68070313 Mepo3g05434 3 68064166 68070313 ECH