Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05433 ATGGAGTCACCACAAGCTAAAAAATCAGGTCTAAACCTCCCAGCAGGGATGTCAACAATAACCTCCCTCCGTCTGGAAACGCTATCAACACCCCCTTCTTCTGCTTCGCCTCGTGCGATTTCAAACCTCTCATCAACCCCCTCTCCATCAAAATCCTCCAAGTGTAGTGACAGATTCATACCTTGCAGATCATCTTCAAGACTGCATACATTCGGATTAATCGATAATCCTTCACCGATTAAAGAAGGGAGTAATGAGGCTTATAATAGGTTGTTGAAATCTGAACTTTTTGGACCTGATTTTGCTTCTCCTTCTTCTTCTCCTGCAGGTTGTGGTGTTGGTTCGCCGTTGGTGAGTCCGAGTAAGAATATGTTGAGGTTTAAGACGGAGAGTTGTGGACCTTCTTCGCCTTTTTCGCCTTCAATATTTGGAAGAAATGATGGTTTTTGTAATGAGGGTTCTACTCCTCCTAAGCCTCCTAGGAAAGTTCCTAAGACACCCCACAAGGTTCTGGATGCTCCTTCACTTCAAGATGACTTTTACTTGAATCTTGTGGATTGGTCCTCACAAAATACTCTAGCAGTGGGACTTGGCACTTGTGTTTATCTCTGGAGTGCTTCAAACAGCAAAGTAACTAAGCTGTGTGACTTGGGGCCTTATGATGGTGTCTGTTCTGTTCAGTGGACCAAGGAGGGTTCCTTCATATCCATTGGTACAAATGGTGGTCAAGTTCAGATTTGGGATGGTACTAAATGCAAGAAGGTCAGAACAATGGGAGGGCATCAAACAAGAACTGGTGTCTTGGCATGGAATTCTCGCATTTTGGCTTCAGGAAGCAGGGATAGGAACATACTTCAGCATGACATGAGGGTTCCAAGCGACTTTATTGGCAAGCTTGTCGGCCACAAGTCCGAGGTTTGTGGATTGAAATGGTCCTGTGATGACAGAGAACTTGCTTCTGGTGGTAATGATAATCAGCTTTTGGTTTGGAATCAGCACTCTCAGCAACCAACTTTGAGACTTACAGAGCACACTGCTGCTGTAAAGGCTATTGCTTGGTCACCTCATCAGAGCAACCTTCTCGTATCCGGAGGTGGAACTGCTGATCGGTGTATTCGATTCTGGAACACTACAAATGGCCATCAATTGAACTCTGTTGACACTGGAAGCCAGGTCTGTAACCTTGCTTGGAGTAAAAATGTAAATGAGCTAGTGAGTACACATGGTTACTCACAAAATCAAATCATGGTGTGGAAATATCCATCACTAGCAAAGGTTGCAACTCTAACCGGCCACAGCATGAGAGTACTATACCTTGCAATGTCTCCTGATGGTCAGACAATAGTTACTGGTGCTGGGGACGAGACTCTGCGGTTTTGGAATGTTTTCCCATCAATGAAAACACCTGCCCCAGTTAAAGATACAGGCCTTTGGTCACTAGGCCGCACCCAAATCCGATGA 1461 0.4504 MESPQAKKSGLNLPAGMSTITSLRLETLSTPPSSASPRAISNLSSTPSPSKSSKCSDRFIPCRSSSRLHTFGLIDNPSPIKEGSNEAYNRLLKSELFGPDFASPSSSPAGCGVGSPLVSPSKNMLRFKTESCGPSSPFSPSIFGRNDGFCNEGSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05433 486 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 429 462 - -
Mepo3g05433 486 ProSitePatterns Trp-Asp (WD) repeats signature. 363 377 IPR019775 -
Mepo3g05433 486 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 44 468 IPR033010 GO:0010997|GO:0097027|GO:1904668
Mepo3g05433 486 ProSiteProfiles Trp-Asp (WD) repeats profile. 429 462 IPR001680 GO:0005515
Mepo3g05433 486 Pfam Eukaryotic translation initiation factor eIF2A 325 460 IPR013979 -
Mepo3g05433 486 CDD WD40 202 461 - -
Mepo3g05433 486 ProSiteProfiles Trp-Asp (WD) repeats profile. 341 385 IPR001680 GO:0005515
Mepo3g05433 486 FunFam FIZZY-related 2 isoform 1 164 464 - -
Mepo3g05433 486 MobiDBLite consensus disorder prediction 22 58 - -
Mepo3g05433 486 SMART WD40_4 334 376 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 208 248 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 292 331 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 164 205 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 379 419 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 251 288 IPR001680 GO:0005515
Mepo3g05433 486 SMART WD40_4 422 461 IPR001680 GO:0005515
Mepo3g05433 486 ProSitePatterns Trp-Asp (WD) repeats signature. 448 462 IPR019775 -
Mepo3g05433 486 Gene3D - 124 463 IPR015943 GO:0005515
Mepo3g05433 486 SUPERFAMILY WD40 repeat-like 162 462 IPR036322 GO:0005515
Mepo3g05433 486 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 299 331 - -
Mepo3g05433 486 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 340 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05433 Mepo-Chr3 68056580 68059823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05433 296 462 Miscellaneous Gene Families AT5G08390 20.833 7.02e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05433 K03364 - gmx:547741 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05433 3 68056580 68059823 Mepo3g05433 3 68056580 68059823 ECH