Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05424 ATGATGATGGGTTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTACACATAATGGTTTGAATTCAAAGGCTGTTGGGAGAGAAGAGGATGTTTCGAGTGGTTTAAACAGAAAGGCCTCTTCTTCATCTGTGCTTCTAAGCTCTAGGACTGAGGGTGAGATATTGCAATCCAACTATTTGAAGTGTTTCACTATCAATGAGGTAAGAGCCGCAACAAGGAACTTTCGTCCAGATAGTATGATTGGCGAAGGTGGATTTGGTTGTGTATTTAAGGGTTGGATCGATGAACACACACTATCTCCTACTAAACCAGGTACTGGTTTTGTTATTGCTGTCAAGAGGCTTAACCAAGAAAGCAATCAGGGACATAGTGAATGGTTGGTGAGTGTCATGTAG 399 0.4236 MMMGCCFSAKVKAESPTHNGLNSKAVGREEDVSSGLNRKASSSSVLLSSRTEGEILQSNYLKCFTINEVRAATRNFRPDSMIGEGGFGCVFKGWIDEHTLSPTKPGTGFVIAVKRLNQESNQGHSEWLVSVM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05424 132 Gene3D Phosphorylase Kinase; domain 1 47 132 - -
Mepo3g05424 132 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Mepo3g05424 132 MobiDBLite consensus disorder prediction 15 41 - -
Mepo3g05424 132 SUPERFAMILY Protein kinase-like (PK-like) 47 124 IPR011009 -
Mepo3g05424 132 PANTHER OS01G0588500 PROTEIN-RELATED 41 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05424 Mepo-Chr3 67853619 67855549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05424 6 132 Glycoside Hydrolase AT3G07070 29.851 1.02e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05424 - - gmx:106795104 183.726