Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05413 ATGGAAGATCCATCGGAGCGGTTAGGATCGGACGGAATTGACACCATCGCCGCCGTGAAAACTGACGACTTATCCATGGAAATTGATCCGCCGTTTCAAGAAAACGCCGTAACTGCCGAAGACTGGCGAAAATCTCTCCGCAAAGTCGTTCCTGCCGTTGTCGTTCTTCGTATCACCGCTACTCGTGCTTTTGACACTGAATCCGCTTCCGCTAGCTCCGCTACTGGTTTTGTCGTTGATAAACGACGTGGTATTATTCTCACTAATCGCCACGTCGTTAAGCCTGGACCTGTTGTTGCTGAAGCGATGTTTTTGAATCGTGAAGAGGTTCCCGTGCATCCGATATATAGAGATCCAGTACATGATTTTGGGTTTTTTCGGTATGATCCTAGTGCTATACAATTTCTAAATTATGAAGAGATACCTCTTGCCCCTGAAGCTGCTAGTGTTGGATTAGAAATCAGAGTTGTTGGAAATGATAGTGGTGAGAAGGTTTCAATTTTGGCTGGTACTCTTGCTCGTTTGGATAGGGATGCTCCTCACTATAAGAAGGATGGGTATAATGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGATCAAGTGGGTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTTGGCCTGAATGCCGGGAGCAAGACAACAAGTGCATCGGCGTTCTTTTTACCTCTGGAAAGAGTTGTGAGAGCATTGAGGTTTCTTCAAAAGGGGAGTGAAACGTATGTTGATAAATGGATGCCAGTTTCTATACCTCGTGGTACTCTTCAGCTGACTTTTCTCCATAAAGGGTTTGACGAGACTCGCCGGCTTGGCCTCAGGAGTGAGACAGAGCAGATAGTACGGAATGCTTCTCCTGCCAGTGAAACTGGAATGCTTGTTGTGGAATCTGTGGTGCCGGGTGGTCCAGCCTATAAACATTTAGAACCGGGTGATGTACTTGTCCGCGTCAATGGTGAAGTCATTACTCAATTCCTGAAACTAGAGACTATACTTGACGACAGTGTAAACTCAAATATTGAATTACAAATTGAAAGGGGTGGCACATCAAAGAGTTTAACTCTTTTGGTGCAAGATTTGCACTCAATAACTCCCAATTATTTCTTACAAGTTAGTGGAGCAGTAATCCAACCTCTTTCATATCAGCAGGCCAGAAACTTCCGATTTCACTGTGGTCTTGTTTATGTGACAGAACCAGGATATATGCTCTTTAAAGCAGGAGTTCCTCGCCATGCAATAATTAAGAAATTTGCTGGTGAAGAAATATCTTGCCTTGAGGAACTAATATCGGTTATTTCTAAGCTATCAAGGGGTGCTCGAGTACCATTGGAGTATATAAGCTACGTGGATCGTCATCGAAGAAAGTCGGTGTTGGTGACGGTTGATCGCCATGAATGGTATGCACCTCCCCGGATTTACACTCGGGACGACAGTACTGGCCTCTGGATTGCTAAGCCTGCTTTTCAGCCTGATTCCCCTTACTTATCATCTGGGGATAAAGATGTTGGAAATCTGGCCAGTCGTCCAAGTTCTTTGACTGGTGAGCATGCTCGTGGGGGAGATGTGTGTGAAAGTAACCATCAGGAGTTGGCCGATGGTGTCACTAGCATGGAAACTAATTCTGAAGATCCTTTAGAGTGTGTATCTCACGGCAATGGATCTGATGGGATAGTCAAGAAACGGAGAGTTGAGGATTTATCAGCTGATGGAAGTGTTGCTGATATTTCCTTAAATGAACCTGAGGAAACCAAGCTAGAAAAATCAAGTGCCTTACCGGATGATGGGTTAATGGACTATCAAGGTGCAACTGCTGCCACAGCAAATGCATCAGTCACTGAACGCGTGATTGAGTCTACTCTTGTGATGTTTGAGGTTCACGTTCCTCCATCTTGTATGCTTGATGGTGTTCATTCACAACATTTTTTTGGAACTGGTGTCATAATATATCACACTCAAGATATGGGATTAGTTGCAGTTGACAAGAACACTGTTGCAGTATCTTCCTCTGATGTGTTGCTATCTTTTGCTGCTTTCCCAGTTGAAATTCCTGGAGAGGTGGTATTTCTCCATCCTGTTCACAATTATGCTCTTGTATCATATGATCCATCTGCTTTGGGACCTGTTGGTGCTTCAGTCGTTCGTGCTGCAGAGTTACTTCCAGAGCCAGCATTACGTCGAGGAGATTCTGTTTACCTTGTGGGCTTAAGTAGAAGCCTTCAAGCAACCTCTAGGAAATCAGTTGTTACCAATCCTTGTGCTGCTTTAAATATAGGATCTGCAGACTCCCCACGTTACAGAGCGACCAATATGGAAGTTATTGAGCTTGATACTGATTTTGGTAGTTCATTTTCGGGTGTGCTAACAGATGAACAAGGAAGGGTCCAAGCTTTATGGGGAAGCTTCTCTACTCAGAAGAAGAAAAAGAGAAGAAAGATGAAAACTGGGAAAAGACGAGACGAGACAATATTTACTCATACTTCAAAAGGCTACCTGATGCTGAAATTCACTGGCAGTACATCAGAAGATCATCAATTCGTGAGGGGGATTCCGATTTATGCAATAAGCCAGGTTCTGGACAAGATCATATCTGGTGCAAATGGGACACCTCTTCTCATAAATGGTGTCAAAAGGCCTATGCCACTTCTGAGAATATTAGAAGTTGAACTTTATCCAACATTACTTTCAAAGGCTCGCAGTTTTGGATTAAGTGATGCTTGGATTCAGGCGTTTGTCAAGAAAGACCCAATAAGACGACAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTGGAGCAAGGGGACATGGTTTTAGCAATCAATAAAGAACCTGTCACATGCTTTCATGACATTGAAAATGCTTGCCAAGCCTTAGATAAATCGGATACCAATGATGGCAAGCTTCAGATGACTATTTTTCGGCAGGGACGAGAGGTTGAACTTCTTGTGGGAACGGATGTTAGGGATGGAAATGGCACAACTCGTACAATTAATTGGTGTGGTTGTATAGTTCAAGATCCACATTCAGCGGTGCGTGCTCTTGGATTTCTTCCTGAAGAAGGTCATGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCAGTACATAGATATGGTCTGTATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAGATATAGATTCTTTTGTTAATGTGACAAAGGAACTAGAGCATGGAGAATTTGTTCGGGTAAGGACAGTTCACCTCAACGGGAAGCCACGAGTCTTAACATTGAAGCAAGATTTACATTACTGGCCTACATGGGAATTGAGGTTTAATCCAGACACTGGAATTTGGCATCGTAATGTAATCAAGGCATTAAACCGCAGTTCTGTATGA 3420 0.436 MEDPSERLGSDGIDTIAAVKTDDLSMEIDPPFQENAVTAEDWRKSLRKVVPAVVVLRITATRAFDTESASASSATGFVVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPSAIQFLNYEEIPLAPEAASVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVGLNAGSKTTSASAFFLPLERVVRALRFLQKGSETYVDKWMPVSIPRGTLQLTFLHKGFDETRRLGLRSETEQIVRNASPASETGMLVVESVVPGGPAYKHLEPGDVLVRVNGEVITQFLKLETILDDSVNSNIELQIERGGTSKSLTLLVQDLHSITPNYFLQVSGAVIQPLSYQQARNFRFHCGLVYVTEPGYMLFKAGVPRHAIIKKFAGEEISCLEELISVISKLSRGARVPLEYISYVDRHRRKSVLVTVDRHEWYAPPRIYTRDDSTGLWIAKPAFQPDSPYLSSGDKDVGNLASRPSSLTGEHARGGDVCESNHQELADGVTSMETNSEDPLECVSHGNGSDGIVKKRRVEDLSADGSVADISLNEPEETKLEKSSALPDDGLMDYQGATAATANASVTERVIESTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHTQDMGLVAVDKNTVAVSSSDVLLSFAAFPVEIPGEVVFLHPVHNYALVSYDPSALGPVGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSSFSGVLTDEQGRVQALWGSFSTQKKKKRRKMKTGKRRDETIFTHTSKGYLMLKFTGSTSEDHQFVRGIPIYAISQVLDKIISGANGTPLLINGVKRPMPLLRILEVELYPTLLSKARSFGLSDAWIQAFVKKDPIRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFHDIENACQALDKSDTNDGKLQMTIFRQGREVELLVGTDVRDGNGTTRTINWCGCIVQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPDIDSFVNVTKELEHGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWELRFNPDTGIWHRNVIKALNRSSV 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05413 1139 SUPERFAMILY Trypsin-like serine proteases 40 244 IPR009003 -
Mepo3g05413 1139 MobiDBLite consensus disorder prediction 505 532 - -
Mepo3g05413 1139 SMART pdz_new 1028 1097 IPR001478 GO:0005515
Mepo3g05413 1139 SMART pdz_new 909 992 IPR001478 GO:0005515
Mepo3g05413 1139 SMART pdz_new 280 359 IPR001478 GO:0005515
Mepo3g05413 1139 SUPERFAMILY PDZ domain-like 304 402 IPR036034 GO:0005515
Mepo3g05413 1139 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Mepo3g05413 1139 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Mepo3g05413 1139 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Mepo3g05413 1139 PRINTS HtrA/DegQ protease family signature 191 208 IPR001940 GO:0004252|GO:0006508
Mepo3g05413 1139 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Mepo3g05413 1139 Pfam PDZ domain 305 357 IPR041489 -
Mepo3g05413 1139 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Mepo3g05413 1139 Pfam PDZ-like domain 373 446 IPR025926 -
Mepo3g05413 1139 Pfam PDZ-like domain 1009 1085 IPR025926 -
Mepo3g05413 1139 Pfam Trypsin-like peptidase domain 74 220 - -
Mepo3g05413 1139 CDD PDZ_serine_protease 280 366 - -
Mepo3g05413 1139 SUPERFAMILY PDZ domain-like 1037 1114 IPR036034 GO:0005515
Mepo3g05413 1139 Gene3D - 281 372 IPR036034 GO:0005515
Mepo3g05413 1139 Gene3D - 145 258 IPR043504 -
Mepo3g05413 1139 Gene3D - 931 1005 IPR036034 GO:0005515
Mepo3g05413 1139 Gene3D - 1012 1110 IPR036034 GO:0005515
Mepo3g05413 1139 Gene3D - 29 140 IPR043504 -
Mepo3g05413 1139 Pfam Peptidase family M50 298 375 IPR008915 GO:0006508
Mepo3g05413 1139 SUPERFAMILY PDZ domain-like 933 1035 IPR036034 GO:0005515
Mepo3g05413 1139 SUPERFAMILY Trypsin-like serine proteases 630 816 IPR009003 -
Mepo3g05413 1139 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 19 1135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05413 Mepo-Chr3 67736616 67753682 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05413 K22686 - gmx:100809144 1989.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05413 3 67736616 67753682 Mepo3g05413 3 67736616 67753682 ECH