Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05410 ATGAATGTTACCAGAAAGAGAAATTACCATTCAATTTCATCTCCATCACCAACAAAAACTACAACACACTCTCCAATACCAATCCCACCTTTAGGTAAAACAAAAACCCTCTTCGAAATAATCTCCACAAACCCATCTTTAACCGTTGAAAAATCCCTTGAAGAATCTCAAATCACCATAACCCCACAAGACGTTGAAAATGTACTCAAACTTTCTTACCGGTTCCCGGCTCAATCGGTTAAATTCTTCCGTTGGGCCGGTCACCGTATTAATCATAACCACACTCCATATGCTTGGAATTTGGTTATTGATATATTAGGTAAAAATTGTTTATTTGATGCAATGTGGGATGCTGTTAAATCAATGCGTCGTGAGGGTTTGTTGTCACGATCCACTTTCGCGTCAATTTTCGCGAGTTATGTTAATGCTGGTAGATTAGCTGATGCTACAATGACTTTTGAGGTTATGGATGGGTATGGTGTTGTTAGGGATGTTGTTTCGTTGAATTCGTTGTTGAGTGCTGTTTGTGGGAGTGGGAGGAGTGTTGAAGCTTGTGATTATTTGCAGATTGCGAAGAAATTGGTTAGACCGGATTCAGATACTTATGCTATTTTGATGGAGGGTTTGGAGAGTGATGGGAATGTTGTTGGTGCGAAGGAGACTTTTGCGGAGATGGTTATTGAAATTGGTTGGGATCCGGGGAATGTGGCTGCGTATGATTCGTTTTTGTGTTGTTTGATTAAGGGGAGTGATGGGATTCGTGAGGCGGTTAAGTTTTTTGATTCGTTGAGAGATAGGAGATGTTATCCGGGGATTAGGTTTTTTAGGGTTGCGTTAGATGAGTGTGCGAGGTTTCATGATATAAGGAGGGCAGAGTTTTTTTGGGAGGTTATGATGGGGAAGACTAAGTTGCAGCCGGCGACGGCTATGTATAATTCGATGATTGCTTTGTATTGTTATCATGGGGATATTGATGCTGCTACGAAGATGCTTGATGGGATGGTTTGTAAAGGGGCGTTTCCGGATTCACTTACTTATAATTTGTTGTTTAGGTTTTTGGTTAAGGGGAGGAAATTAAGGGATGCGACGAGGGTGTTTGTGGAGATGGTGAAAAATGAGTGTGTGCCGGATCAGCTTAATTGTGATGCAGCTGTTAGGGTTTATTTGGATAATGGGGATCCTGTTATGGCTATCAAAGTTTGGAAATGTTTGGTAGAGAATTACCGTGAGGATTTGGAGGGTACTGCAAATTTGCTAGTTGTAGGGCTTCGAGATAATGATAGGGTCCCTGAAGCAGTTAAGTATGCTGAGCATATTATTGGAAGAGGAATCAAGTTGACTTCTTCGACATTGTCGAAGTTGAGACAAAGCCTTGTCAAAGACAGAAAAGAATTTGTGTATGATGAACTTATAGCGAAGTGGAAAGCGGCCTATTAG 1437 0.4113 MNVTRKRNYHSISSPSPTKTTTHSPIPIPPLGKTKTLFEIISTNPSLTVEKSLEESQITITPQDVENVLKLSYRFPAQSVKFFRWAGHRINHNHTPYAWNLVIDILGKNCLFDAMWDAVKSMRREGLLSRSTFASIFASYVNAGRLADATMTFEVMDGYGVVRDVVSLNSLLSAVCGSGRSVEACDYLQIAKKLVRPDSDTYAILMEGLESDGNVVGAKETFAEMVIEIGWDPGNVAAYDSFLCCLIKGSDGIREAVKFFDSLRDRRCYPGIRFFRVALDECARFHDIRRAEFFWEVMMGKTKLQPATAMYNSMIALYCYHGDIDAATKMLDGMVCKGAFPDSLTYNLLFRFLVKGRKLRDATRVFVEMVKNECVPDQLNCDAAVRVYLDNGDPVMAIKVWKCLVENYREDLEGTANLLVVGLRDNDRVPEAVKYAEHIIGRGIKLTSSTLSKLRQSLVKDRKEFVYDELIAKWKAAY 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05410 478 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g05410 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 235 270 IPR002885 -
Mepo3g05410 478 MobiDBLite consensus disorder prediction 1 27 - -
Mepo3g05410 478 Pfam PPR repeat 98 127 IPR002885 -
Mepo3g05410 478 Pfam PPR repeat family 307 353 IPR002885 -
Mepo3g05410 478 NCBIfam pentatricopeptide repeat 345 377 IPR002885 -
Mepo3g05410 478 NCBIfam pentatricopeptide repeat 310 342 IPR002885 -
Mepo3g05410 478 NCBIfam pentatricopeptide repeat 97 127 IPR002885 -
Mepo3g05410 478 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 40 463 - -
Mepo3g05410 478 Gene3D Tetratricopeptide repeat domain 73 230 IPR011990 GO:0005515
Mepo3g05410 478 Gene3D Tetratricopeptide repeat domain 249 424 IPR011990 GO:0005515
Mepo3g05410 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
Mepo3g05410 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05410 Mepo-Chr3 67692717 67695207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05410 112 473 Glycosyltransferase AT1G05670 23.607 2.53e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05410 - - tpra:123894758 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05410 3 67692717 67695207 Mepo3g05410 3 67692717 67695207 ECH