Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05404 ATGGACCAAGAAGAAGTTCGCAAGATCTTCAACAAATTCGACAAGAACGGCGACGGGAAGATCTCACGCACAGAGCTGAAGGAGATGATGACGGCGCTCGGATCTAAAACAACTACGGAGGAAGTTACTCGTATGATGGAGGAGCTTGATCGGAACGGAGACGGTTTCATTGATCTGAAGGAATTTGGGGAGTTACACAACGGCGGTGGCGATACTAAGGAGCTTAGAGAGGCGTTTGAGATGTATGATTTGGATAAGAATGGGTTGATTTCGGCGAAAGAGCTCCACGCGGTGATGCGGCGGTTGGGGGAGAAATGCTCGCTTGGTGATTGCCGGAGAATGATCGGAAACGTTGATGCTGATGCTGATGGGAATGTGAATTTTGAAGAGTTTAAGAAGATGATGAGTCGCTCCTAA 417 0.482 MDQEEVRKIFNKFDKNGDGKISRTELKEMMTALGSKTTTEEVTRMMEELDRNGDGFIDLKEFGELHNGGGDTKELREAFEMYDLDKNGLISAKELHAVMRRLGEKCSLGDCRRMIGNVDADADGNVNFEEFKKMMSRS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05404 138 FunFam Probable calcium-binding protein CML27 69 138 - -
Mepo3g05404 138 FunFam Calmodulin A 1 68 - -
Mepo3g05404 138 SMART efh_1 41 69 IPR002048 GO:0005509
Mepo3g05404 138 SMART efh_1 5 33 IPR002048 GO:0005509
Mepo3g05404 138 SMART efh_1 110 138 IPR002048 GO:0005509
Mepo3g05404 138 SMART efh_1 74 102 IPR002048 GO:0005509
Mepo3g05404 138 Pfam EF-hand domain pair 4 62 IPR002048 GO:0005509
Mepo3g05404 138 Pfam EF-hand domain pair 73 136 IPR002048 GO:0005509
Mepo3g05404 138 ProSitePatterns EF-hand calcium-binding domain. 83 95 IPR018247 -
Mepo3g05404 138 Gene3D - 1 69 - -
Mepo3g05404 138 ProSiteProfiles EF-hand calcium-binding domain profile. 70 105 IPR002048 GO:0005509
Mepo3g05404 138 ProSitePatterns EF-hand calcium-binding domain. 14 26 IPR018247 -
Mepo3g05404 138 SUPERFAMILY EF-hand 3 137 IPR011992 -
Mepo3g05404 138 ProSiteProfiles EF-hand calcium-binding domain profile. 37 65 IPR002048 GO:0005509
Mepo3g05404 138 ProSitePatterns EF-hand calcium-binding domain. 50 62 IPR018247 -
Mepo3g05404 138 CDD EFh 74 136 IPR002048 GO:0005509
Mepo3g05404 138 Gene3D - 71 138 - -
Mepo3g05404 138 ProSiteProfiles EF-hand calcium-binding domain profile. 1 36 IPR002048 GO:0005509
Mepo3g05404 138 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 74 136 - -
Mepo3g05404 138 ProSiteProfiles EF-hand calcium-binding domain profile. 106 138 IPR002048 GO:0005509
Mepo3g05404 138 CDD EFh 5 62 IPR002048 GO:0005509
Mepo3g05404 138 ProSitePatterns EF-hand calcium-binding domain. 119 131 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05404 Mepo-Chr3 67611509 67612523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05404 2 136 EF-hand Containing Proteins AT1G18210 55.556 3.90e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05404 K13448 - gmx:100791597 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05404 3 67611509 67612523 Mepo7g02128 7 31763043 31763955 PCT