Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05376 ATGGTTATGCATTTTCTTCTTATGCTTCTTTTTGCAGTATCTACCGTTGCTGCTGATGAAGAACCATTTATCGGGGTAAACATTGGCACCGATCTCTCAGACATGCCTCACCCTACTCAAGTAGTAGCACTGCTTAAAGCTCAGCAAATTCGACATATTCGATTGTACAATGCAGACCAAGCTATGCTAACAGCACTATCAAAATCAGGAATTCAAGTTGTTATCTCTGTCCCTAATGAAGAGCTTCTAGCAATTGGTCAATCAAATTCCACAGCTTCAAATTGGGTTTCTCGCAATGTGTTGGTATACTATCCAGCCACAAATATCACAGCAATTTGTGTTGGTTCTGAGGTTTTAACCACACTCCCAAATGTAGCAAAAGTCTTAGTCAACGCTCTTAACTACATTCATTCAGCCCTTGTCGCATCGAATCTTGATCGTCAGATCAAAGTTTCGACGCCTCTTCCTTCTACCATCATACTTGATTCATTTCCACCTTCACAAGCCTTCTTTAACACATCACTGAATCAAGTCTTGAAACCAATGCTAGATTTCTTGCAATCCACTCAATCTTATCTCATGCTTAACGTTTACCCTTACCATGATTACATGGAATCAAATGGCGTGATCCCGTTGGATTATGCACTCTTCAAACCAATTCCACCAAACAAAGAATCTATTGATTCCAACACACTTCTTCATTACTCAAATGTGTTTGATGCTGTTGTTGATGCAGCGTATTTTGCGATGTCGTATCTGAATTACACCAACATTCCCGTAGTGGTGACCGAAACCGGTTGGCCTTCAAAAGGTAGTTCTGATGAGCCTGATGCAACACTTGCCAATGCTAATACTTACAACAGCAATTTGATCAAGCACGTGTTGAATAAAACTGGAACTCCAAAGCGCCCCGGGATTAGTGTTAGTACTTATATCTACGAGCTCTATAACGAAGACAAACAGCCAGGGGCATTGTCAGAGAAAAATTGGGGACTATTTGATTCAAATGGTGTGCCTGTTTATGTTTTGCAATTGACAGGTTCAGGTGCAGTTTTGGCAAATGATACAAAAGGTGAAACTTATTGTGTTGCTAAAGATGGTGCTGATCCAAAGATGTTGCAGGCGGGAATAGATTGGGCTTGTGGACCTGGAAAAGTGGATTGTTCTCCATTGTTGCAGGGAAAACCATGCTATGATCCTGATAATGTTGTTGCTCATGCTAATTATGCTTTTGATGCTTATTATCATAAGATGGGAAAGTCTACTGAGTCATGTAACTTCAATGACATGGCTACTATCTCCACTTCAGATCCAAGTCATGGTTCTTGTATATTTCCAGGAAGTCTCGGCTTCTCTAACGCCCCTGCTCCTGCACCATCACATTTTTCTGGGTGTAATCGATGTGAGTTGAGAATTAGAAGCCTTCTAACTGTGATAGGACTTCTAATATTGGAAGTGGTTTCGCTATAA 1470 0.4075 MVMHFLLMLLFAVSTVAADEEPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHIRLYNADQAMLTALSKSGIQVVISVPNEELLAIGQSNSTASNWVSRNVLVYYPATNITAICVGSEVLTTLPNVAKVLVNALNYIHSALVASNLDRQIKVSTPLPSTIILDSFPPSQAFFNTSLNQVLKPMLDFLQSTQSYLMLNVYPYHDYMESNGVIPLDYALFKPIPPNKESIDSNTLLHYSNVFDAVVDAAYFAMSYLNYTNIPVVVTETGWPSKGSSDEPDATLANANTYNSNLIKHVLNKTGTPKRPGISVSTYIYELYNEDKQPGALSEKNWGLFDSNGVPVYVLQLTGSGAVLANDTKGETYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGKPCYDPDNVVAHANYAFDAYYHKMGKSTESCNFNDMATISTSDPSHGSCIFPGSLGFSNAPAPAPSHFSGCNRCELRIRSLLTVIGLLILEVVSL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05376 489 FunFam Glucan endo-1,3-beta-glucosidase 3 23 348 - -
Mepo3g05376 489 Pfam X8 domain 361 432 IPR012946 -
Mepo3g05376 489 Pfam Glycosyl hydrolases family 17 24 344 IPR000490 GO:0004553|GO:0005975
Mepo3g05376 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 433 IPR044965 GO:0004553|GO:0005975
Mepo3g05376 489 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Mepo3g05376 489 Gene3D - 355 445 - -
Mepo3g05376 489 SMART X8_cls 360 445 IPR012946 -
Mepo3g05376 489 Gene3D Glycosidases 23 349 - -
Mepo3g05376 489 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Mepo3g05376 489 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05376 Mepo-Chr3 67264768 67268126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05376 18 489 Glycoside Hydrolase AT1G66250 67.708 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05376 K19891 - gmx:100799965 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05376 3 67264768 67268126 Mepo3g05376 3 67264768 67268126 ECH