Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05368 ATGGTTGCTTTGGTTTCTCAAGAAAATGTTGTCACATTGGTTTCTCGTACCGGTAGAGAGTTACAACGTTATAGAAAAGGTCGTCGCCAAGTTGTTGGATGTATACCATACAGATATAAGATTGGAGAGAAAAATTCATTGGATGTTTCAGATGAATTGGAAGTTCTTGTTATAAGTTCTCAAAAAGGCAAAGGGATGCTATTTCCGAAGGGAGGCTGGGAATTAGATGAATCTCAAAAGGAGGCAGCTTTGAGAGAAACCATGGAGGAAGCTGGTGTACGAGGCATTGTTGAGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAAACATATGATACTTTATATGATGGTTACATGTTTCCTCTACTTGTTCAAGAGGAATTAGAGTTCTGGCCTGAACAAAACCTTCGTCAAAGAAGATGGATGAGCATATCTGAAGCAAGAGATGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGACTAGTAAACCGTCTCATAGGTCAAAAACTTGGTTCTGAGAAGCAAGTTCTACGTCCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAAAAGTGTAA 588 0.3929 MVALVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRYKIGEKNSLDVSDELEVLVISSQKGKGMLFPKGGWELDESQKEAALRETMEEAGVRGIVEGKLGKWSFKSKTYDTLYDGYMFPLLVQEELEFWPEQNLRQRRWMSISEARDVCQHWWMKEALDRLVNRLIGQKLGSEKQVLRPLNCIGDAKSDLLKV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05368 195 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 167 - -
Mepo3g05368 195 SUPERFAMILY Nudix 23 167 IPR015797 -
Mepo3g05368 195 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Mepo3g05368 195 Pfam NUDIX domain 54 161 IPR000086 -
Mepo3g05368 195 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Mepo3g05368 195 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Mepo3g05368 195 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Mepo3g05368 195 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05368 Mepo-Chr3 67174230 67176733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05368 K07766 - mtr:11422584 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05368 3 67174230 67176733 Mepo7g02089 7 31233187 31236033 PCT