Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05360 ATGTTATTGTTCCAACATTGCAACAACAACAAAAACAAAATGTATATCTTTCTCTTTGTTCTCTTCTTCTCTATCAACCCTTCTCAACAAACAAACTCAACTAAAACAAAAACAAACACACTCTCACTATCTTTTCCTTTAACATCACTCTCTCTTTCCAACGACACAACCACAAAAATGCTATACACATCTCAACTATTTTCAACTACAAAAAAACCAAACAACCCACAAAACAAAACAACAACAACACCTTCTTATAACTACAAATTCTCATTCAAATATTCAATGGCTCTTATCATTAACCTCCCCATTGGAACACCACCTCAGACTCAACCAATGGTGTTGGACACAGGTAGCCAACTTTCATGGATTCAGTGTCACAAAAAACAACCTCCAACAGCATCCTTTGATCCTTCTCTCTCTTCAACTTTCTCTATCCTCCCTTGTACTCACCCTCTCTGTAAACCACGAATTCCCGATTTTACCCTCCCAACTTCTTGTGACCAAAACCGTCTCTGCCACTATTCCTATTTTTACGCAGACGGCACTTATGCTGAGGGTAATCTCGTCAGAGAAAAATTCACATTTTCACGTTCCGTTTCTACCCCTCCTTTAATCTTGGGCTGTGCTACAGAATCTACTGACCCTAGGGGTATTTTAGGAATGAATCTTGGTCGTTTATCCTTTGCTAAACAATCCAAAATTACTAAATTCTCCTATTGTGTACCTCCACGTCAAACTCGACCCGGTTTTACTCCAACCGGATCGTTTTATCTCGGTAACAACCCGAGTTCCAAGGGGTTTAAGTATGTCGGCATGATGACTTCTTCACGTCAACGCATGCCGAATTTTGACCCCTTGGCTTATACAATCCCGATGGTCGGGATAAGAATTGCCGGCAAAAAATTAAACATCTCACCGGCAGTTTTCCGTGCGGACGCTGGCGGGTCAGGTCAAACCATGATTGATTCCGGATCAGAATTCACTTATTTAGTTAGTGAAGCTTATGATAAAGTGCGGGATCAAGTAGTTAGAGCTGTGGGGCCCAGACTAAAGAAGGGTTACGTGTACGGTGGAGTAGCTGACATGTGTTTTGACAGTGTAAAAGCAGTTGAGATCGGACGGCTGATAGGTGAGATGGTGTTTGAATTTGAAAGAGGTGTGGAGGTTGTGATTCCAAAAGAAAGAGTACTTGCTGACGTGGGTGGTGGGGTCCACTGTATTGGGATTGGAAGTTCCGATAAATTAGGTGCTGCAAGTAATATTATTGGGAATTTCCATCAACAGAATCTATGGGTGGAATTTGATCTTGTGAGGCGTAGGGTGGGGTTTGGTAAAGCTGATTGTAGCAGATTAGCGAAGTAG 1365 0.4183 MLLFQHCNNNKNKMYIFLFVLFFSINPSQQTNSTKTKTNTLSLSFPLTSLSLSNDTTTKMLYTSQLFSTTKKPNNPQNKTTTTPSYNYKFSFKYSMALIINLPIGTPPQTQPMVLDTGSQLSWIQCHKKQPPTASFDPSLSSTFSILPCTHPLCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSVSTPPLILGCATESTDPRGILGMNLGRLSFAKQSKITKFSYCVPPRQTRPGFTPTGSFYLGNNPSSKGFKYVGMMTSSRQRMPNFDPLAYTIPMVGIRIAGKKLNISPAVFRADAGGSGQTMIDSGSEFTYLVSEAYDKVRDQVVRAVGPRLKKGYVYGGVADMCFDSVKAVEIGRLIGEMVFEFERGVEVVIPKERVLADVGGGVHCIGIGSSDKLGAASNIIGNFHQQNLWVEFDLVRRRVGFGKADCSRLAK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05360 454 Pfam Xylanase inhibitor C-terminal 288 445 IPR032799 -
Mepo3g05360 454 ProSiteProfiles Peptidase family A1 domain profile. 98 445 IPR033121 -
Mepo3g05360 454 FunFam Aspartyl protease family protein 77 256 - -
Mepo3g05360 454 Pfam Xylanase inhibitor N-terminal 100 248 IPR032861 -
Mepo3g05360 454 Gene3D Acid Proteases 257 454 IPR021109 -
Mepo3g05360 454 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 113 124 IPR001969 GO:0004190|GO:0006508
Mepo3g05360 454 PANTHER ASPARTYL PROTEASE-RELATED 18 450 IPR001461 GO:0004190|GO:0006508
Mepo3g05360 454 CDD pepsin_A_like_plant 99 449 IPR034161 -
Mepo3g05360 454 Gene3D Acid Proteases 70 256 IPR021109 -
Mepo3g05360 454 SUPERFAMILY Acid proteases 99 452 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05360 Mepo-Chr3 67071259 67073215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05360 102 454 Miscellaneous Gene Families AT1G77480 25.195 7.15e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05360 - - psat:127083785 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05360 3 67071259 67073215 Mepo3g05360 3 67071259 67073215 ECH
Mepo3g05360 3 67071259 67073215 Mepo7g02084 7 31204434 31206025 PCT