Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04872 ATGTCTTCTCCCAATCAACCACCATCTTCTCCAACCCCTTTCGATATGCACACTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACATTTCTTCTCAATTCCCTTCCTCCGCTCCTTCACCACCACCACCTTCTTCATCCTCCTCCTACCCTTTCCCTCACAACAACAATAACTACCCTTACGATCACCACCATCACCAGCTTCAGCATCAACATCAACAAAACCAGACCAATTTTCCAATTCAACACCGTTCAATTTCATTTCCTACACCCCCTCTTCAACCACCTCAACAACCTCAACCAATCCCACCTCCTTCAAATCCTAACGCTGGTGCCCGTCTCATGGCTCTCCTCAGCACCCCTCCAATCCAACAACAACAACCACCACCGCCACAATCACAGCCCATTTCCTCTGGCGCTGTTAATCCGGCGATAACTGCTGCCAATGCTGCCGCGGCAGCGTTGATTAGGCTGCCGAGCAGTAAGGTGCCGAAAGGAAGGCATTTGATTGGTGATCATGTTGTGTATGATGTGGATGTTAGGTTGCCTGGTGAAGTGCAGCCTCAGCTTGAGGTTGCACCGATTACAAAATATGGATCGGATCCTAATCCGGTTTTGGGTCGACAGATTGCTGTGAATAAGTCTTATATTTGTTATGGGTTGAAACAGGGGAATATCAGGGTGCTTAATATTCATACTGCTGTTAGATCTTTGCTTAGAGGCCACACTCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTTCTGAAGGCCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTGTTCAAATAGTCGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAAATTTTGATAGTTGGTATGGGAAAAAATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTCGTAGCAGAAGATCCTCCAAAATGTCCTCTTGACAAGCTCATTGATGGGGTTCAACTTGTTGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCAGCATCACAGGATGGCACGATAAAGATATGGGAAGATCGGAAGACACAGCCGCTTGCTGTTTTCAGACCTCATGATGGGCATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTAATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTCTGGGTCTCAGCTAGTGAAGAAGGTTGGCTGCTTCCAAGCGATACTGAAACATGGAAATGCACTCAGACTTTGGAGTTGAAGAGTTCAGCTAAGCTGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTGGAATATGGTCCTAATCCCGAATCAACTCGCATGGATTATATGGCCGAGTTTACTGTGACCATGCCCATTCTTAGTTTTACTGGAACAAGTGATATTTTGCCTCACGGGGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCTTTGGATTTAGCACAATGCTTGCCTCCACCATTAGAAAATGCAGGACTAGATAAGTCTGATTCCAGTGTTTCACGAGATGCAATTACTGCTGAAGGATTTTCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGTCTTTACCCAGTTCTGCTCCCAAAACAATGATGCAAGCAAGTAGCACTGAGAGTGGTCTCGTGTCAAGATACCCTTTAAGCTCAGGTCATACTGAAGCACCTATTTCTAGACAAATCAGCAGTTCAAATGTTGAAGCTAAAACTGTTACACTGGCTCCTTCTAGTAGTGATGCAGATATTGTTTGTGTTCCTTCTATACCTCCTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCAGTTGACAGACAAATGGATACAATTCACAGGAACTTGTCCGACCAATTTAATAGCGATACAAAGAATGATGACAATAAAATCAAACAGGATGACATTTCTACTGTACTTAACCCTTCTGCCATTTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCCTCTGAGACTAATATGGTCGATAGAGTGAGTGAGGTAGAAACAAAGATCCAGGATGTGGTTGATGTGGGTAATGCCGAAGTAGAAGTGAAAGTGGTAGGTGAAGCAAGGCCTAATCAAAATGATGAACTTGGCAGGCAGGGGCCACAACAAAACCCAGTTTTTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATTTTGGCATTGAGATGGCCCGAGAATGTGGTGCGATAGGTGGGGAGACTTACATTACAGAGGAACCTGGACAAGTTGATTCTACTGGAGGGGACTCGCTGGCCCAACCTTCCAATGCAGGTGAGGATGGACTCCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCCGACTCATCTACATCAATGGTAGTACCGCCATCACCTGCATCTAATACAAAAGGGAAGAGACAAAAGGGTAAGAATTCTCAACCATCTGGTCCGTCTTCCCCGTCTCCAAGTGCATGCAATTCAACCGATTCGTCCAATGAACCAAATGGAATTTCAAACCTCCCATGTACTGAAAATAGCTATCCTCAAATTGTGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTAACCGTTCCAGTTACAAAAGAGGGTAGAAGGCTCGAGGCAGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAAAATGCAAAAAATGAGAAGTTGTTGCGAGACCGTTTCCAACATGTTACAGGTTTGATTACTAACTTCATGAACAAGGATCTACCAGCAGTATTGGAGAAAACTGTAAAGAAGGAAATGACTTCAGTTGCGCAAGCTTTAGTTCGTTCAATGTCTCCTGCTATTGAGAAAACATTATCCTCTACTATAGCAGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATTTAAAGCTCGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGTCAAACAGGCGCTTCAGGATGCACTCAAATCCAGTTTTGAAACAACAGTGGTCCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTTGATTCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAACAACGCCTTGAATCTGGGCCTACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCTGGCACATTGAATACTCTACCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGCACCACTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAGCGGAAATATGAGGAGGCATTTATTGCAGCACTACACAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATGGACTTTTGACATTGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAGCTGGCGTGTGATATCAACAATGACATGTCCCGAAAGCTCTCGTGGATGACAGACGTGGCTACTGCTATTAATCCCTCAGATCCCATGATAACAATGCATGTGCGACCCATCTTCGAGCAAGTCTATCAGATACTGAACCATCAACGTAACTTGCCTTCTATCACTGGATCTGATCTCTCAAGTACCCGTCTTTTATTGCATGTCATCAACTCCATGCTGACGACATGTAAATGA 4131 0.4401 MSSPNQPPSSPTPFDMHTFFNPPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQHQHQQNQTNFPIQHRSISFPTPPLQPPQQPQPIPPPSNPNAGARLMALLSTPPIQQQQPPPPQSQPISSGAVNPAITAANAAAAALIRLPSSKVPKGRHLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAVQIVGEEKVEHPQICWHCHKQEILIVGMGKNVLRIDTTKVGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAVFRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSASEEGWLLPSDTETWKCTQTLELKSSAKLSLKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYMAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENAGLDKSDSSVSRDAITAEGFSSLDSSAGRTSEMSLPSSAPKTMMQASSTESGLVSRYPLSSGHTEAPISRQISSSNVEAKTVTLAPSSSDADIVCVPSIPPPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVDRQMDTIHRNLSDQFNSDTKNDDNKIKQDDISTVLNPSAIFKQPTHLVTPSEITKASSSSETNMVDRVSEVETKIQDVVDVGNAEVEVKVVGEARPNQNDELGRQGPQQNPVFDGKEKFFCSQASDFGIEMARECGAIGGETYITEEPGQVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSMVVPPSPASNTKGKRQKGKNSQPSGPSSPSPSACNSTDSSNEPNGISNLPCTENSYPQIVAMQDSLNQLLTMQKEMQKQMTMTVTVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRFQHVTGLITNFMNKDLPAVLEKTVKKEMTSVAQALVRSMSPAIEKTLSSTIAESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTVKQALQDALKSSFETTVVPAFEMSCKAMFEQVDSTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRTNSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLTLVPLPLSQGVVLSLLQQLACDINNDMSRKLSWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRNLPSITGSDLSSTRLLLHVINSMLTTCK 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04872 1376 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 359 392 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 853 945 - -
Mepo3g04872 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 282 IPR001680 GO:0005515
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 683 698 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 1 113 - -
Mepo3g04872 1376 Gene3D - 293 668 IPR015943 GO:0005515
Mepo3g04872 1376 SMART WD40_4 233 273 IPR001680 GO:0005515
Mepo3g04872 1376 SMART WD40_4 355 392 IPR001680 GO:0005515
Mepo3g04872 1376 SMART WD40_4 395 441 IPR001680 GO:0005515
Mepo3g04872 1376 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 193 505 IPR032401 -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 90 109 - -
Mepo3g04872 1376 FunFam enhancer of mRNA-decapping protein 4 192 506 - -
Mepo3g04872 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 359 401 IPR001680 GO:0005515
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 72 89 - -
Mepo3g04872 1376 Gene3D - 165 292 IPR015943 GO:0005515
Mepo3g04872 1376 SUPERFAMILY WD40 repeat-like 206 472 IPR036322 GO:0005515
Mepo3g04872 1376 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1374 IPR045152 GO:0031087
Mepo3g04872 1376 FunFam Enhancer of mRNA-decapping protein 4 1288 1374 - -
Mepo3g04872 1376 Gene3D - 1288 1376 IPR044938 -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 800 821 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 18 50 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 593 644 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 854 872 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 890 945 - -
Mepo3g04872 1376 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 240 277 - -
Mepo3g04872 1376 MobiDBLite consensus disorder prediction 663 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04872 Mepo-Chr3 60837166 60845556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04872 K12616 - gmx:100798228 2039.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04872 3 60837166 60845556 Mepo3g04872 3 60837166 60845556 ECH