Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04871 ATGAAGATCACTGTCATGACTTCTGATGAACAAATTCTCAATTTGGATGTTGATCCCAATGAATCTGTGGAAAACGTCAAGGCATTACTTGAGGTTGAGACAAGTGTGCCTATTCAGCAACAACAGATTCTGTTCAATGGGAACGAGGTGAGCAATTCTCAGAAATTGAGTGCACTTGGTGTCAAGGATGATGATTTGCTAATGATGACTGTCTCGGGTGCCGGTGCCGGCGCTGCTGCTTCTAGCGGATCTACCAATGATTTGAGCTTCAATACTGATGGATCTGCTATGAACCCTGCTGCTTTTCAGCAGCACTTTAGACGTGATTCTAATTTGATGGGTCAGCTCTTTCAGAATGATCCGGAGTTAGCACAAACTATTCTGGGTAATGATCTCAATAAAATCCAGGAAATTTTACGATTGCGTCATCGCCAAAGAAGTCAATTACAGCGTCAAAAAGAAGAAGAGTTGGCTCTTCTTTACGCAGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATCCGCCAGAAAGGAATTGATGATAATTGGGAAGCTGCACTTGAACATAATCCCGAAGCTTTTGCAAGAGTGGTCATGTTGTATGTGGACATGGAGGTTAATGGTGTACCGCTGAAGGCATTTGTTGATAGTGGAGCACAATCTACCATTATATCAAAAACCTGCGCTGAGCGTTTAGGATTGCTGAGACTTTTAGATCAGCGTTACAAAGGAATGGCTCATGGAGTTGGCCAAACCGAAATACTGGGTAGAATACATGTAGCTCCAATCAAGATTGGGAATATATTTTACCCTTGTTCGTTCTTAGTGCTGGACTCTTCCAATATGGAGTTTCTCTTTGGGCTGGATATGCTCCGAAAGCATCAGTGTATAATTGATTTGAAAGAAAATGTTTTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCCCGGTTTTTAGATGAGGAAAAGTATTCCAAGGAAGCTTCAAGCTCAGGAAGCCCACTTCCAGTTGCATCGGGGAGTAATAATCCGTCACAAGGAGGTGTGTCTTCTGGAGGAGCTTCTGGTGACAAATCTAAGGACTCTGAGTTTGAAAGCAAAGTTGCAAAGCTTGTTGAGCTAGGATTTGAAAGACAGGCAGTTATACAAGCTCTTCAATTATTTAATGGCAATGAGGAACAAGCAGCTGGGTTTCTTTTTGGGTGA 1239 0.4237 MKITVMTSDEQILNLDVDPNESVENVKALLEVETSVPIQQQQILFNGNEVSNSQKLSALGVKDDDLLMMTVSGAGAGAAASSGSTNDLSFNTDGSAMNPAAFQQHFRRDSNLMGQLFQNDPELAQTILGNDLNKIQEILRLRHRQRSQLQRQKEEELALLYADPFDVEAQKKIEAAIRQKGIDDNWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKTCAERLGLLRLLDQRYKGMAHGVGQTEILGRIHVAPIKIGNIFYPCSFLVLDSSNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYSKEASSSGSPLPVASGSNNPSQGGVSSGGASGDKSKDSEFESKVAKLVELGFERQAVIQALQLFNGNEEQAAGFLFG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04871 412 MobiDBLite consensus disorder prediction 334 372 - -
Mepo3g04871 412 CDD Ubl_Ddi1_like 1 71 IPR033882 -
Mepo3g04871 412 SUPERFAMILY Ubiquitin-like 1 84 IPR029071 -
Mepo3g04871 412 CDD RP_DDI 187 310 IPR019103 GO:0004190|GO:0006508
Mepo3g04871 412 CDD UBA_scDdi1_like 376 411 - -
Mepo3g04871 412 Pfam Ubiquitin family 3 71 IPR000626 GO:0005515
Mepo3g04871 412 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 410 - -
Mepo3g04871 412 FunFam DNA damage inducible 1 homolog 2 180 327 - -
Mepo3g04871 412 Gene3D - 1 85 - -
Mepo3g04871 412 Pfam Aspartyl protease 180 302 IPR019103 GO:0004190|GO:0006508
Mepo3g04871 412 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Mepo3g04871 412 Gene3D - 338 412 - -
Mepo3g04871 412 SMART ubq_7 1 72 IPR000626 GO:0005515
Mepo3g04871 412 Pfam UBA/TS-N domain 376 409 IPR015940 -
Mepo3g04871 412 Coils Coil 135 155 - -
Mepo3g04871 412 SMART uba_6 375 412 IPR015940 -
Mepo3g04871 412 SUPERFAMILY Acid proteases 187 303 IPR021109 -
Mepo3g04871 412 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 370 412 IPR015940 -
Mepo3g04871 412 Gene3D Acid Proteases 181 327 IPR021109 -
Mepo3g04871 412 MobiDBLite consensus disorder prediction 339 368 - -
Mepo3g04871 412 SUPERFAMILY UBA-like 370 412 IPR009060 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04871 K11885 - gmx:100779464 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04871 3 60823996 60831015 Mepo3g04871 3 60823996 60831015 ECH