Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04843 ATGGCGCCAGCAACTAAGAAAAAACCTTCAAAGCCAGTCAAACCTCAAAAAGCACCTAAAAAAGTTCAAATTGTTCCAATCAAAGAAGATTCCACTTCTGAATCCGAAGAAGAAGAAGCACCACCGCTGCAACATCTCGAACTCGATGGTTCTGATTCCGACTTATCTTCTGATGGTGATGATCAATTAGCTGATGATTTTCTCCAAGGAAGCGATGACGAAGACGAAGACAACGACGATGAAGAGAAAGGTTCGGATTTGGAATCTGGGTCGGGTTCGGATGAGGATGATGATTCGGAATCGGGTGAGGATGATATTGAAAGGAAGTCTGAACTTATTGATAAACGAAGGGAGAGAGATCACAAGGCAGCTGCAGATGATTTGCAGACTAATATTCAGACTAATATTCAAGATGAGTCTGATGAGTTTACATTACCAACTAAACAGGAACTTGAGGAAGAGGCTTTGCGTCCCCCAGATCTTTCCAATCTACAGAGGAGGATTAAAGACATTGTTCGTGTTCTTTCCAATTTTAAGGCATTGAGACAAGATGGGGCGACGAGGAAGGATTATGTTGATCAGCTTAAGACCGATATACGTTCATACTATGGCTACAATGAGTTTCTAATCGGTGCTTTAGTGGAGATGTTTCCAGTCGTTGAACTGATGGAACTGATTGAAGCCTTCGAAAAGCCTCGCCCAATATGTCTGAGGACAAACACTTTAAAGACACGAAGACGGGATTTGGCAGATGTCTTGATAAACAGAGGAGTAAATCTGGATCCTCTCAGCAAATGGTCAAAAGTTGGACTTGTTGTGTATGATTCTCAAGTACCAATTGGTGCCACTCCAGAGTACATGGCTGGTTTTTACATGCTTCAAAGTGCTAGTTCTTTTCTGCCTGTGATGGCCTTGGCTCCTCAAGAAAAGGAGAGGATTGTTGATATGGCGGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTAATGAAGAACTCAGGAATAATTTTTGCAAATGAAATGAAGGTACCACGACTAAAATCTCTGACTGCAAATCTGCATAGGATGGGTGTATCGAACACTGTAGTCAGCAACTATGACGGGAAGGAGCTTCCAAAGGTTTTGGGTTTCAATTCGGTTGATAGGGTATTATTGGATGCCCCTTGCAGTGGAACTGGGGTTATATCGAAAGATGAGTCAGTCAAAACTTCAAAGAACTTGGAAGATATAAAGAAATGTGCTCATCTACAGAAGGAGCTCCTTCTTGCTGCAATTGACATGGTAGATTCTTATTCTAAATCTGGGGGATACGTTGTATATTCTACATGCTCAATCATGGTTGCCGAGAATGAAGCAGTTATTGATTATGTGCTCAAAAGGAGGGATGTAAAGCTGGTTCCCTGTGGACTTGACTTTGGGCGTCCAGGGTTTACAAAATTTAGGGAACAGCGTTTTCATCCTTCATTAGATAAGACAAGACGTTTCTATCCACATGTACACAATATGGATGGGTTTTTTGTAGCAAAGTTGAAAAAAATGAGCCATCCAAAACCTGCTGCAACATCTGAAACATTTGAAGAAGTTGTAAATGAAACCGAGCTTTTGATGGACGACGATAAACCTAGTAATGGCGTTAAAGAAAATGGCAAACATTCTTCTGAACCTGAATCCAAGAAGAGGAAGAAAGATAAATTCCCCTCAAAACCAAGTAATGATGTAAAATCCAATGTCAAAGAAGCTTCTGAACCTGAATCCAAGAAGAGTAAGAAAGATAAATTCCCCTCGAAACCAAGTAATGATGTAAAAGCTAATGTCACAGAAGCTTCTGAACCTAAACCCAAGAAGAGGGAGAAAAGGAAACCTCCATCTAGAGAGGAGATTTCAAAAGCCAGAGAGGAGAAGAGACTTGCTTTAATAGAAAAGAAGAGAAAAAGTGGTAAGCAACAGAGAAAAGAAAATGATGAATGA 1971 0.4079 MAPATKKKPSKPVKPQKAPKKVQIVPIKEDSTSESEEEEAPPLQHLELDGSDSDLSSDGDDQLADDFLQGSDDEDEDNDDEEKGSDLESGSGSDEDDDSESGEDDIERKSELIDKRRERDHKAAADDLQTNIQTNIQDESDEFTLPTKQELEEEALRPPDLSNLQRRIKDIVRVLSNFKALRQDGATRKDYVDQLKTDIRSYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEMKVPRLKSLTANLHRMGVSNTVVSNYDGKELPKVLGFNSVDRVLLDAPCSGTGVISKDESVKTSKNLEDIKKCAHLQKELLLAAIDMVDSYSKSGGYVVYSTCSIMVAENEAVIDYVLKRRDVKLVPCGLDFGRPGFTKFREQRFHPSLDKTRRFYPHVHNMDGFFVAKLKKMSHPKPAATSETFEEVVNETELLMDDDKPSNGVKENGKHSSEPESKKRKKDKFPSKPSNDVKSNVKEASEPESKKSKKDKFPSKPSNDVKANVTEASEPKPKKREKRKPPSREEISKAREEKRLALIEKKRKSGKQQRKENDE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04843 656 MobiDBLite consensus disorder prediction 53 84 - -
Mepo3g04843 656 MobiDBLite consensus disorder prediction 105 126 - -
Mepo3g04843 656 Pfam 16S rRNA methyltransferase RsmB/F 302 512 IPR001678 GO:0008168
Mepo3g04843 656 MobiDBLite consensus disorder prediction 608 656 - -
Mepo3g04843 656 Gene3D Vaccinia Virus protein VP39 301 653 IPR029063 -
Mepo3g04843 656 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 225 514 IPR001678 GO:0008168
Mepo3g04843 656 Gene3D Sun protein; domain 3 191 298 - -
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase signature 496 513 IPR023267 GO:0001510
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase signature 436 452 IPR023267 GO:0001510
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase signature 285 299 IPR023267 GO:0001510
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase signature 314 324 IPR023267 GO:0001510
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase signature 382 394 IPR023267 GO:0001510
Mepo3g04843 656 MobiDBLite consensus disorder prediction 535 598 - -
Mepo3g04843 656 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 221 298 IPR031341 -
Mepo3g04843 656 FunFam Ribosomal RNA methyltransferase Nop2 192 298 - -
Mepo3g04843 656 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 96 516 IPR023267 GO:0001510
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 188 208 IPR023273 GO:0008168
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 221 233 IPR023273 GO:0008168
Mepo3g04843 656 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 244 257 IPR023273 GO:0008168
Mepo3g04843 656 NCBIfam NOL1/NOP2/sun family putative RNA methylase 237 513 IPR011023 GO:0003723|GO:0006396|GO:0008757
Mepo3g04843 656 MobiDBLite consensus disorder prediction 535 656 - -
Mepo3g04843 656 MobiDBLite consensus disorder prediction 1 141 - -
Mepo3g04843 656 MobiDBLite consensus disorder prediction 127 141 - -
Mepo3g04843 656 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 199 513 IPR029063 -
Mepo3g04843 656 ProSitePatterns NOL1/NOP2/sun family signature. 381 392 IPR018314 GO:0003723|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04843 Mepo-Chr3 60568460 60575879 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04843 K14835 - gmx:100807160 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04843 3 60568460 60575879 Mepo3g04843 3 60568460 60575879 ECH