Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04829 ATGCTACCCAAAGTGGACATATTTGTGTGTACGGCAAATCCGGAGATTGAACCACCAATAATGGTGATCAACACAGTACTATCTGTGATGGCATATGATTATCCAACAGAGAAGCTTAATGTGTATCTTTCAGATGATGCTGGATCAGATATTACATTTTATGCTCTCTTGGAGGCTTCTAAATTTGCTAAGCATTGGTTGCCATTTTGCAAGAGATTCAAGGTTGAACCTAGGTCGCCAAGTGCATATTTCAAGACTTTAGACACTTACCCTAATAATGCTAAAGAGCTTTTGGCCATCAAGAGAATGTACCAAGATATGGAAAGTCGAGTAGAAAATGCATCCAAGTTGGGTGAAGTACCGAAGGAAACATACTCAAATCATAAGGAATTTTCTCAATGGGATTCTTATTCATCTAGACGTGACCATGACACAATTCTTCAAATACTGCTTCATAGAAAGGACAATGCAAGAGATGAAGATGGGTTTGTTATGCCCACCTTGGTATATTTGGCTCGTGAGAAAAGACCCAAATTTCATCATAACTTCAAAGCTGGAGCCATGAATTCATTGATAAGGGTGTCATCAATGATTAGCAATGGGAAAATAATTCTGAATGTAGATTGTGACATGTACTCAAACAATTCTCAATCTCTAAGGGATGCACTTTGCTTCTTCATGGATGAAGAAAAGGGACATGAAATTGCCTTTGTGCAGGCTCCTCAGGGCATTGCAAATATCACAAAAAATGACATATACGGTGGTTATTTTCGTATACCTCATGAGGTGGATTTACATGGCTTTGATGGATTTGGCGGACCCATGTATATTGGAACTGGTTGCTTTCACCGAAGAGATGTACTATGTGGAAGAAAGTATAGTGATCAATACAAGATTGATTGGAAGAATGCAAATGTTGAAAATATTGACCATATGATAAAAGAAGCAAGCTTGCAAGAGCTAGAAGAAAAATCAAAGACTCTTGCAAGTTGCACCTATGAGGAAAACACATCATGGGGAAAAGAGATGGGACTACTATATGATTGTGTAGTGGAGGATGTAATAACAGGATTATATATTTTATGTAAAGGATGGACATCAGTATATTATAATCCAACAAGGAGACCTTTCTTAGGTTTGACTCCAACAACTTTACCAGAATCACTTGTTCAACATAAGAGATGGTCTGAAGGAGGCTTTCAAGTTGCACTTTCAAAGTTCAGTCCTATTTGGTATGCTTTTGGATTGATCAATCCAGGTCTTCAAATGTCTTATTGTTACTATAATCTATGGGTATTAAACTCCTTTCCAACTATGTATTATTGCATCATCCCTTCACTTTATCTCCTCAAAGGCATTCCATTGTTCCCACAGATTTCAAGTCCATGGTTCATACCTTTTGCATATGTCATAGTTGGGGATTCAACATACTGTTTGTTAGAGTTTTTAAGGGTAGGAGGTACAATTAAAGGTTGGTGGAATGAGTTAAGGATGTGGGTTTACAAGAGAACAAGTTCTTACCTTTTTGCTTTTGTTGATACTATGTTGAAGATTTTTGGATTTTCAAATTCAGCTTTCATAATATCGGCTAAGGTAGCTGAAGAAAATGTTTCACAAAGATATGAGAAGGAAATTTTGGAGTTTGGAAACTCATCTCCAATGCTCACTTTATTGGCTACATTTGCAATGTTGAATTTGTTTTGTCTTGTTGGGGTGTTGTTAAGGAAGGTTGTGTTAAGTGGAGCAAGTGTTAGAATATTCGAGGCAATGTTATTACAAGTTTTACTAAGTGGGGTTTTGGTTCTTATCAATATACCTCTTTATCAAGGTCTTTTCCTAAGGAAAGATAAAGGAAGATTGCCAAGATTTGTGATTGATAGAGAAGAATGTTTCTCTCATCATGTTCAATATGAAGGAGATGCAGTACATGCTTCATTTGTTGTGATAAGCGTTACTGATTCAACTTGGCATTTAACTCAAGAAGGTTTAGATCTTATGGTTAGAGGACCTTCTGGTGATCAAATTCGTGAATTTCGGGATAAAACAAGTGAGAAATTTGACTTTGTAGCTCATACCAGAGGACCATATCACTTTTGCTTCACTAACAAGTCTCCTTATCGTGAAAAAATCGACTTTGATGTTCATTCTAACCATTTTTCAACCTTTGAACAACCTGCACAAGATGAGCATTTTACCCCAATGTTAGATCAAATAATAAAGTTAGAGGAAGCTCTTTTCAACATTCAGTATGAACAACATTGGCTTGAGGCTCAAACAGAACGTCAATCAATAATAAATAATGCAATGAGCTCCAGAGCAATTCACAAGGCCTTACTTGAATCAGCAGCACTAATTGGAGCCAGCACACTCCAAGTTTATCTTCTTCGCCGCCTCTTCGAACGAAAGCTTGGCTTGTAG 2418 0.371 MLPKVDIFVCTANPEIEPPIMVINTVLSVMAYDYPTEKLNVYLSDDAGSDITFYALLEASKFAKHWLPFCKRFKVEPRSPSAYFKTLDTYPNNAKELLAIKRMYQDMESRVENASKLGEVPKETYSNHKEFSQWDSYSSRRDHDTILQILLHRKDNARDEDGFVMPTLVYLAREKRPKFHHNFKAGAMNSLIRVSSMISNGKIILNVDCDMYSNNSQSLRDALCFFMDEEKGHEIAFVQAPQGIANITKNDIYGGYFRIPHEVDLHGFDGFGGPMYIGTGCFHRRDVLCGRKYSDQYKIDWKNANVENIDHMIKEASLQELEEKSKTLASCTYEENTSWGKEMGLLYDCVVEDVITGLYILCKGWTSVYYNPTRRPFLGLTPTTLPESLVQHKRWSEGGFQVALSKFSPIWYAFGLINPGLQMSYCYYNLWVLNSFPTMYYCIIPSLYLLKGIPLFPQISSPWFIPFAYVIVGDSTYCLLEFLRVGGTIKGWWNELRMWVYKRTSSYLFAFVDTMLKIFGFSNSAFIISAKVAEENVSQRYEKEILEFGNSSPMLTLLATFAMLNLFCLVGVLLRKVVLSGASVRIFEAMLLQVLLSGVLVLINIPLYQGLFLRKDKGRLPRFVIDREECFSHHVQYEGDAVHASFVVISVTDSTWHLTQEGLDLMVRGPSGDQIREFRDKTSEKFDFVAHTRGPYHFCFTNKSPYREKIDFDVHSNHFSTFEQPAQDEHFTPMLDQIIKLEEALFNIQYEQHWLEAQTERQSIINNAMSSRAIHKALLESAALIGASTLQVYLLRRLFERKLGL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04829 805 FunFam Cellulose synthase-like protein E1 135 305 - -
Mepo3g04829 805 Pfam emp24/gp25L/p24 family/GOLD 627 800 IPR009038 -
Mepo3g04829 805 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 622 - -
Mepo3g04829 805 SMART EMP24_GP25L_2 620 800 IPR009038 -
Mepo3g04829 805 Pfam Cellulose synthase 320 617 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo3g04829 805 Pfam Cellulose synthase 5 303 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo3g04829 805 SUPERFAMILY Nucleotide-diphospho-sugar transferases 5 440 IPR029044 -
Mepo3g04829 805 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 135 299 IPR029044 -
Mepo3g04829 805 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 86 IPR029044 -
Mepo3g04829 805 ProSiteProfiles GOLD domain profile. 628 750 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04829 Mepo-Chr3 60374806 60384985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04829 2 621 Glycosyltransferase AT1G55850 55.233 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04829 - - cave:132173712 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04829 3 60374806 60384985 Mepo3g04829 3 60374806 60384985 ECH