Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04826 ATGTCGGATAACGGTCGGCCACTGCCCAAATTCGGTGAATGGGATGTCAATGATCCAGCCTCAGCTGAGGGGTTCACAGTGATTTTTAACAAGGCAAGGAATGAGAAAAAGACAGGTGGAAATCCTGAGTCACCAGGAAAGACCGCCTCTGAACCTCATAGCAAACCTGCATTAGATCCTGCCAAACCTCCGAGTGTAAGATACTATTTAGTTTATACATACATAAAACTGACACGCACAGATGCACTGCTGTTTGTTAGATAA 264 0.447 MSDNGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGNPESPGKTASEPHSKPALDPAKPPSVRYYLVYTYIKLTRTDALLFVR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04826 87 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Mepo3g04826 87 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 51 IPR040387 -
Mepo3g04826 87 MobiDBLite consensus disorder prediction 31 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04826 Mepo-Chr3 60350308 60354255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04826 - - aprc:113854386 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04826 3 60350308 60354255 Mepo3g04826 3 60350308 60354255 ECH