Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04824 ATGAAACTACGAACACTTCCTTCTTCTTCGGCACTATCACGTGCTCTATCACGTGCCTTAACCTCTTCAACCGCTACACCAAGCACACCACCGCAATGCGAATCAGCGTTTCCATCGAAGACAGTCACCGTTGCAAATTTCGAATCGTCGTTAGCTGAGCTCCGGCACCATGTCCGATCGTCGGACTTCGTCGCCATCGACCTCGAGATGACCGGCGTTACCAGTTCTCCATGGCGTGATTCATTCCAGTTTGATCGCTCCGATGTTCGGTATCTCAAGGTTAGAGACTCCGCCAGTAGGTTCGCCGTTGTTCAGTTTGGCGTTTGTCCTTTCCGATGGGATTCGTCTAACCAGTCCTTCGTTGCATATCCGTACAATTTCTATGTTTTTCCGCGTCAGGAGCTTTCTGGTGTTGGCCCATGTAATGAATTTCTCTGCCAGACTACTTCGATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCATGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCAATAAGGAGTTTGAATTCAACACATGATAGTGAGTGTTCAGACATTTCTAAATTAAATGATGTTAGGGACATACCTTCTGTCTACATGGCAGACATTTTATTCACTGCACGGATGAGAGATAAGTTCAGTGAATGGCGTGATGGGTTATTACAGGAGCAAAATCGGTCAGACCAAATTCAAGGATCTCGAAAAGACTCAAAACAACAATTTCAATTGATTTTCTTTAAGACACATCCAGCTCTCAAGCTTGATGGATTCACCTCACGTCAGCTTAAGTTGATTCAGTTGGTCATCAAAAAGCACTTCAAAGATCTTTCTTATATCAATGTGAACAATGAGGTTTCTGGTTCCCAACAAATAGTTGTGTATACAGACTCGGAGGATGAATTAAACTTACTTCTGAAGGAGGTAAAAGAGGAGAATTACAGGGCAAAAGTGATGAAGATCCAAGCTGCAGTCGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGTCATAACTGTTTTTTAGATATTGCTCATGTCTACAGCAAATTTATCGGTCCTCTTCCCGAGACTCCAGAAAAGTTTGTTGCCTCTGTTAACAAGTGCTTTCCACACATTGTTGACACCAAAATACTCATGAACACTAATTTAATGCTCCAAGAAAGAATGAAAAAGTCCAGAAAATCACTTGCCTCTGCATTTTCTATGTTTTGTCCACAAATTGCGGCTGGCTCCAAAAGCACCGAGCTAGTTACACCATCCCAAGTGAAAGTAAACGTTGAAGTTGATAATTCAAGATCGTCCAGCTGGAATCCTGGAGGCAAGCATGAGGCAGGATATGATGCTTTCATGACTGGATGTATCTTTGCCCAGTTATGCAGTGATTTAGGAGTTGATTTTAAACTCCATGAATCTTCAAAACAATTAGCTTTCAATGAGAAACTACAGAAATACATTAATCGTCTATATCTTAGTTATATGCATGGGGATATTATAGATCTAAATACCGGTTATACGGTTGAAAATTCTTCACCAAGCTATAACCTCAAGAGACGGTACCAACAAATTTTGTTTGAGAACATTGTTATTATCTGGGGATTTCCTTCTAACCTGAAGGCAAGCGAAGTACGAGAGTGTTTATCTAAAGTTTTCGGTTTAACTTCTGTAGTTTCTGTCTACCACTTGGATGCAACAGCAGTGTTTGTACAGTTTAACAAGACTCAATTAGTTTCCGACTTTCTTTTGTTGAAGGAAAGCTTAGAGAGAAGTAATGGTCCAATCTCAGTTTTGCATCCGCTGGGAAAACTTTTGGAAGGTGGAAATACATGTGCTGCTAATTATGATGCTTATAAAGAAATTTGTGGTTCACCCTTATCAGAAACTCTGTTTGCTGATCAGGCAAAGGCAGTTGGCATGAAGTGGAAAACTAAATTGATCGAATACAAGGAATCGTTGAGGAGTGATGAACATGAAAATCCAACTATAGAAGAGAATGTAAATGATGAAGCTATTAGTTTGTAG 2064 0.4026 MKLRTLPSSSALSRALSRALTSSTATPSTPPQCESAFPSKTVTVANFESSLAELRHHVRSSDFVAIDLEMTGVTSSPWRDSFQFDRSDVRYLKVRDSASRFAVVQFGVCPFRWDSSNQSFVAYPYNFYVFPRQELSGVGPCNEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQEREAIRSLNSTHDSECSDISKLNDVRDIPSVYMADILFTARMRDKFSEWRDGLLQEQNRSDQIQGSRKDSKQQFQLIFFKTHPALKLDGFTSRQLKLIQLVIKKHFKDLSYINVNNEVSGSQQIVVYTDSEDELNLLLKEVKEENYRAKVMKIQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYSKFIGPLPETPEKFVASVNKCFPHIVDTKILMNTNLMLQERMKKSRKSLASAFSMFCPQIAAGSKSTELVTPSQVKVNVEVDNSRSSSWNPGGKHEAGYDAFMTGCIFAQLCSDLGVDFKLHESSKQLAFNEKLQKYINRLYLSYMHGDIIDLNTGYTVENSSPSYNLKRRYQQILFENIVIIWGFPSNLKASEVRECLSKVFGLTSVVSVYHLDATAVFVQFNKTQLVSDFLLLKESLERSNGPISVLHPLGKLLEGGNTCAANYDAYKEICGSPLSETLFADQAKAVGMKWKTKLIEYKESLRSDEHENPTIEENVNDEAISL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04824 687 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 42 636 - -
Mepo3g04824 687 MobiDBLite consensus disorder prediction 667 687 - -
Mepo3g04824 687 Pfam CAF1 family ribonuclease 42 470 IPR006941 -
Mepo3g04824 687 Gene3D - 274 518 IPR036397 GO:0003676
Mepo3g04824 687 Gene3D - 41 209 IPR036397 GO:0003676
Mepo3g04824 687 SUPERFAMILY Ribonuclease H-like 41 483 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04824 Mepo-Chr3 60326612 60333956 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04824 K01148 - gmx:100784997 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04824 3 60326612 60333956 Mepo3g04824 3 60326612 60333956 ECH