Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04814 ATGGACGAAGACGGAGGGCACGACGGTGATCAATTCCACCGCAACGAAGCCATATCCGCCGTCACCGATGATGGTTTCATAGCCGAAGAAGATGAAGATTACGAAGATCTTTACAACGATGTTAATGTTGGTGAGGGTTTTCGTCAATCTTTGCAAAAAAATGAGCTTTCAGAAGTTAAAATTGACGCCGTTGAAGAAAAGAAGCTTCCTCCACCACCGCCGTTGCCACTGCCGCCGCCACCACCGCTGACAGCTCAGGTTGCAGGTGGGGTTTCTGGGTTTCAGAATCAAGAGCTTATAGGGAATGAAGTGGGTGTTCAAGGAGGTGGGATTAGGGTTGAATTAGGGCAAAAAGCTGCTACCTTGAGTGGGATTGGGGAACAGGGTGGTAATGCTGGGGTTGAGTTGCAGGGGATTATTGGGCAACAACAACAACCACCAGTTGGGGTTGGTGGTTTTGTCGGGGGTGTTGGAAATGATGGGTTGATGAGACAAGGTCAAGGTGGGGGTGTTGGTGGAGGAAGTGGGGGTGCAGGTGGTGGTGGAGGAAGTACTGTATTGTTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGATTTGGAAGCTGAGCTTTGTAAGTATGGACAAGTGAAGGATGTGAGGTTTTTCGACGAGAAAGCTAGTGGGAAATCGAAGGGGTACTGTCAGGTTGAGTTTTATGATCCTTTAGCTACAACTGCTTGTAAGGAAGGGATGAATGGTCATTTGTTTAATGGTAGGCCGTGTGTTGTATCTTATGCGAATCCTTATACTGTTAAGAAAATGGGAGAGGCTTTGAATAATAGGAATCAACCAGTGAACCAAACTGCCGGGGCGAACCAGGGAAGGAGAGGACCTGCTGAGGTTGGAGGGGTTAAGCCGGGTGGTGGTAACGTTGGGACTGGTGGTAACTACCAAGGTGGTGATGGGAATACTAATAATAATAGAGGTGGTGGAAGAGGTAATTGGGGGAGAGGGAACAATCCTGGGATGGGGAATAGAGGACATGGTAATCCGATGAGGAATAGGGGCGGTGGGATGGGTGGTAGAGGTATGATTGGTAATGCTGGAAATGGGTATGGACCTGGTATTGGCGCTGTCCCGCCTATGATGCATCCGGGTTTTGATCCTTCATTTGGTGGTCCCATTGGTCGAGTGGGTGGCTATGCAGGCTATCCCGGTGGCCCAACGCCTCCGTTCTCTGGTATGATGCCTTCATACCCTGGTATGCATGGAGTAGCACCTCATGTTAATCCTGGCTTTTTTGGAAGAGGGATGCATATGAATGCTATAGGGATGGTCCCACCATCAGGTATGGATGGTCCTAATATGGGAATGTGGCCGGATCCAAATATGGGTGGATGGGGTGGTGATGAACTTGGTGGTGGCAAGGTTGCAGAGTCAAGTTATGGGGAGGAAGCCGCATCTGACCATCAGTATGGTGAGGTGAATCCTGATAGAGCTGGTTGGCCTAATGCAATGAGAGAAAAAGATAGAGGATCAGAGAGGGATTGGTCGGGTACTTCTGAACGAAAGTTCAAGGATGATAGGGATCATGAATATGAGAGAGAAGCACCTAGAGAAAAAGATGTGGGCCATGACCATGAAGAAAGAAGGAATCGTGATGATAGAGAGATGGGACGAGAACGGTCTCGGGACCGTGATCGTGCAAGATCTCGAGACCATGATCGTGACCGCGAAAGGGGCCGGGAGCGTGACCGTGAGCGTGACAGGCACAGGGAAGACAGGGACAAGTTTGCTGATCATCATAGATACAAAGACCGTGACTCACCGCATGATGATGAATGGGAGAGGGGACGATCTTCTAGGACTCGTAGCAAATCACGATTATCAACACATGAGGAGGAACATCATTCTAGAAAAGAATCTGATTATGGAAAGAGGAGGCGGCTTACCTCCGATTAA 1947 0.491 MDEDGGHDGDQFHRNEAISAVTDDGFIAEEDEDYEDLYNDVNVGEGFRQSLQKNELSEVKIDAVEEKKLPPPPPLPLPPPPPLTAQVAGGVSGFQNQELIGNEVGVQGGGIRVELGQKAATLSGIGEQGGNAGVELQGIIGQQQQPPVGVGGFVGGVGNDGLMRQGQGGGVGGGSGGAGGGGGSTVLFVGDLHWWTTDADLEAELCKYGQVKDVRFFDEKASGKSKGYCQVEFYDPLATTACKEGMNGHLFNGRPCVVSYANPYTVKKMGEALNNRNQPVNQTAGANQGRRGPAEVGGVKPGGGNVGTGGNYQGGDGNTNNNRGGGRGNWGRGNNPGMGNRGHGNPMRNRGGGMGGRGMIGNAGNGYGPGIGAVPPMMHPGFDPSFGGPIGRVGGYAGYPGGPTPPFSGMMPSYPGMHGVAPHVNPGFFGRGMHMNAIGMVPPSGMDGPNMGMWPDPNMGGWGGDELGGGKVAESSYGEEAASDHQYGEVNPDRAGWPNAMREKDRGSERDWSGTSERKFKDDRDHEYEREAPREKDVGHDHEERRNRDDREMGRERSRDRDRARSRDHDRDRERGRERDRERDRHREDRDKFADHHRYKDRDSPHDDEWERGRSSRTRSKSRLSTHEEEHHSRKESDYGKRRRLTSD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04814 648 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 14 586 IPR034772 -
Mepo3g04814 648 MobiDBLite consensus disorder prediction 454 648 - -
Mepo3g04814 648 SUPERFAMILY RNA-binding domain, RBD 180 269 IPR035979 GO:0003676
Mepo3g04814 648 MobiDBLite consensus disorder prediction 1 29 - -
Mepo3g04814 648 MobiDBLite consensus disorder prediction 277 357 - -
Mepo3g04814 648 MobiDBLite consensus disorder prediction 498 648 - -
Mepo3g04814 648 MobiDBLite consensus disorder prediction 311 328 - -
Mepo3g04814 648 CDD RRM_CFIm68_CFIm59 187 260 - -
Mepo3g04814 648 SMART rrm1_1 186 259 IPR000504 GO:0003723
Mepo3g04814 648 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 256 IPR000504 GO:0003723
Mepo3g04814 648 Gene3D - 178 271 IPR012677 -
Mepo3g04814 648 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 263 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04814 Mepo-Chr3 60205988 60210098 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04814 K14398 - fve:101300984 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04814 3 60205988 60210098 Mepo3g04814 3 60205988 60210098 ECH