Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04794 ATGAACTCGGGTGACCTACACAAAGTTTGGGAAATCAGAGCTCTGAAGAGGATGCCAGAGACAGAAAAAGCTCACAAGATGTTGGAGAAAATTGCCAAACAGGTTCAGCCTATTATGCATAAACATAAATGGAGGGTTAAGCTTCTCTCTGAAATGAACCCTACCAATCCAGCTCTTCTGGGATTGAATGTTGGAGCAGGTATACATGTAAAGTTGCGGCTACGGAGGCCAAACAGGGAGTCAGACTTTTACCCATTTGATCAAGTTTTAGATACGATGCTTCATGAGCTTTGTCATAATGCACATGGTCCTCATAATGCCAGCTTCTACAAGCTCTGGGATGAACTTAGAAAGGAATGTGAAGAGTTGATGGCTAAGGGGATAACTGGCTCTGGGGAGGGTTTTGATCTCCCAGGAAAGCGCTTGGGTGGTAATTCTCGTCAACCTCCACTCTCGTCTCTACGTAAAACTGCACTTGCAGCTGCAGAAAAGAGATCACAGGTGGGAACTCTTCTTCCATCTGGACCAAATCGTATTGGAGGTGATAGTGTTATAATGAAGGCACTTAGTCCAGTACAAGCTGCTGCGATGGCTGCAGAAAGGAGATTACAGGATGACTTATGGTGTGGTTCTCAATCTTGTGATAATTCAGATCATGAAGATGTTAACCGTGAATCTGCTGAAAACCTTGTAAATAAGCAGATAATTGTGGGAACCTCGAGACTAACAGACAATTCTACTCTACCTTTGGATCCGACATCTCGAAAAAGAAGCCGTGACAAGGATTCAAGTTTACCAGTTCATTCATCTAGTAACCCTAAATTTGTTGATTTGACAATGGATACACCCAAAAAGGGATGTGTCAATGGACATCAGATAGGGTCTCAACAAAGAAGTTCTGGATTAGAAAGCATTTTACATTCACAAGCAGGATTGACTTCTAAAAATTTACCAAGTTCATCTGGGTCACTATCTGGTGATAGTAGAACACTTCATTCTGAAGAAACTGCAATGTGGCAATGTCTGATGTGCACTCTATTAAATAAATCATTAGCCCCCATCTGTGAATTGTGTGGCACACAACAGCCAAAAGATGTTACCACCAAGCACAACACTTGGTCTTGTAAATTTTGTACGTTGGAAAACAGTGCAAAGTTGGAGAGATGCTCAGCCTGTGACGAGTGGAGATACTCTAATGGCCCCAACCTTGGCCCTTGA 1218 0.4261 MNSGDLHKVWEIRALKRMPETEKAHKMLEKIAKQVQPIMHKHKWRVKLLSEMNPTNPALLGLNVGAGIHVKLRLRRPNRESDFYPFDQVLDTMLHELCHNAHGPHNASFYKLWDELRKECEELMAKGITGSGEGFDLPGKRLGGNSRQPPLSSLRKTALAAAEKRSQVGTLLPSGPNRIGGDSVIMKALSPVQAAAMAAERRLQDDLWCGSQSCDNSDHEDVNRESAENLVNKQIIVGTSRLTDNSTLPLDPTSRKRSRDKDSSLPVHSSSNPKFVDLTMDTPKKGCVNGHQIGSQQRSSGLESILHSQAGLTSKNLPSSSGSLSGDSRTLHSEETAMWQCLMCTLLNKSLAPICELCGTQQPKDVTTKHNTWSCKFCTLENSAKLERCSACDEWRYSNGPNLGP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04794 405 Pfam WLM domain 8 204 IPR013536 -
Mepo3g04794 405 MobiDBLite consensus disorder prediction 243 281 - -
Mepo3g04794 405 SMART zf_4 371 395 IPR001876 -
Mepo3g04794 405 SMART zf_4 337 361 IPR001876 -
Mepo3g04794 405 Gene3D - 332 372 - -
Mepo3g04794 405 ProSitePatterns Zinc finger RanBP2-type signature. 373 392 IPR001876 -
Mepo3g04794 405 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Mepo3g04794 405 ProSitePatterns Zinc finger RanBP2-type signature. 339 358 IPR001876 -
Mepo3g04794 405 SUPERFAMILY Ran binding protein zinc finger-like 334 362 IPR036443 -
Mepo3g04794 405 ProSiteProfiles Zinc finger RanBP2 type profile. 369 398 IPR001876 -
Mepo3g04794 405 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04794 Mepo-Chr3 59942225 59945936 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04794 K22685 - gmx:100795976 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04794 3 59942225 59945936 Mepo3g04794 3 59942225 59945936 ECH