Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04704 ATGTGGAAGTTCATGGCTCTCCCTCATCTACTTCTTCTGCTTGTTCTTCATTGCTCATTGTTTGTGGCATTGGTATCTGGATGGAAAACATTGCAAGGATCACCACCCGTGGTAATAGCGCGAGGTGGATTTTCAGGAATATTTCCAGATTCAAGTTTAGCTTCCTATAACTTGGCACTAAAAGCTAGTTCCCCAAATATCACTCTATGGTGTGACTTGCAACTGACAAAGGATGGAGTTGGGTTTTGTTTTCCAGACATCAAGCTTGACAATGCCACCGACATTTCCATTGTTTACCCTGGCAAAGCTAAGGATTACTCAGTTAACATGGTTCCAACTCGCGGATGGTTTTCTTTTGATTTCAGCTTCAAAGAACTACAAATAGTCTCACTTGTTCAAGGAGTGTATTCTCGAACTCCAAAGTTTGATGGAAGTAACTATTATATTCTCAGTGTTGAAAATGTCGCTAAATTGGTAAAATCATCATCAGCAGGCCTGTGGTTAAACGTTCAGCATGATACATTCTACAAGCATCACAATTTGAGTGTAGAGAAATATCTTCACTCTCTTTCAGCTGAAAAAGTATCTATCAGTTACATCTCATCGCCTAACGCGAATTTCTTGCAAAGAGTAAGAACAAAATCAAGTCTTAAAAAAACCGTCACAGTCTTCAGGTTTCTAGATCAATATAAAATTGAACCTACAACCAACAAAACTTATGGTGCACTCCTGAAACACCTAAAATTCATCAGAACGTTTGCTTCTGGAATTCTTATTCCAAAAAGCTATATATGGCCTGTAGACTCGGAACTTTATCTACATCAACATACTTCTCTTGTCTCAGATGCTCATAAACATGGGCTGAAAGTTTTTGTTTCAGATATTGTTAATGATGTCCCATTCAGCTACAATTTCAGTTACGATCCTATGGCTGAGGTTCTGTCTTTCATTGACAACGGTAACTTCTCTGTTGATGGTGTTCTGTCTGATTTCCCGGTAACTCCGTCTGCAGCCATAAATTGCTTTGCTGGCATAGGAAGAAATGCAAAAAAACAAGTGGAGACTTTGATTATTACAAAATATGGAGCGAGTGGTGACTATCCAGCTTGCACCGATCTTGCATATAAGAAAGCAAAATCAGATGGAGCAGATGTGATTGATTGTCCTGTTCAATTGTCCAAGGATGGAATACCCTTTTGCTTAAGTTCTATAGATCTTTCAACGAGTACAACAGTTGCTGATACAAAATTCCAAAACCGCACAGCGATTATTCCAGAGATTCAAAATGGCAGTGGCATATATGCATTTAGCTTGACATGGAATGAAATCAAAACATTGACTCCCTCAATATTGAAACCTTATGCGAAATATGCATTGTTCCGGAATCCCAAATTTAAAAATCAAGGGAAACTTGTAACTTTGTCTGATTTTCTGTCCTTGGCTAAAGGCTCTGGCGTCTTGATCAGCATCGAGAATGCTGCATACCTCGTATCAAAGCGGAGATTAAGCGTGACCAAAGCAGTCCTTAATGCTCTGCAAAAGGCAGGTTACGATAAACAAAAATCTCATAAAGTTATGATTCAGTCAACACACAGCTCAGTACTTAAGATATTCAAGGACAAATCCAAATATGAAAGAGTTTACAAAGTTGATGAGAATATTCATGATGCCGATGATAAAGCTATCGATGACATCAAAACGTTTGCTGATTCTATTGTGCTACAGAAGGCTTCTGTTTTTACTCAAAATTTAGCTTTTCTTGTTAACTCTACAAATACTGTAGCAAGACTGCAATCATTTAAACTACCAGTTTATGTAGAAACTTTCAGCAATGAATTTGTATCTCAAGCATGGGATTACTACTCAGATCCATCTGTTGAGATTAATTCATTTGTCGTTGGAGCTAAGGTTAATGGTATTATTACTGACTTCCCAAAGACGGCTGTTCGATACACGAAGAACAGGTGTTTGAAGCATGCCAAAAAAGCACCTTATATAAGCCCTATTCCACCTGGAAAACTTTTAAAACAAATACCTAAATTAGACCTTCCACCACCTTCGCCTCCACTTCCAGTCTTAAATGATAGTAATGTGATAGAACCACCTTTGCCTAGTGTTTCTGGAAAGTTTTCAATTTCCGGGGCTGCTCGTTGA 2154 0.3835 MWKFMALPHLLLLLVLHCSLFVALVSGWKTLQGSPPVVIARGGFSGIFPDSSLASYNLALKASSPNITLWCDLQLTKDGVGFCFPDIKLDNATDISIVYPGKAKDYSVNMVPTRGWFSFDFSFKELQIVSLVQGVYSRTPKFDGSNYYILSVENVAKLVKSSSAGLWLNVQHDTFYKHHNLSVEKYLHSLSAEKVSISYISSPNANFLQRVRTKSSLKKTVTVFRFLDQYKIEPTTNKTYGALLKHLKFIRTFASGILIPKSYIWPVDSELYLHQHTSLVSDAHKHGLKVFVSDIVNDVPFSYNFSYDPMAEVLSFIDNGNFSVDGVLSDFPVTPSAAINCFAGIGRNAKKQVETLIITKYGASGDYPACTDLAYKKAKSDGADVIDCPVQLSKDGIPFCLSSIDLSTSTTVADTKFQNRTAIIPEIQNGSGIYAFSLTWNEIKTLTPSILKPYAKYALFRNPKFKNQGKLVTLSDFLSLAKGSGVLISIENAAYLVSKRRLSVTKAVLNALQKAGYDKQKSHKVMIQSTHSSVLKIFKDKSKYERVYKVDENIHDADDKAIDDIKTFADSIVLQKASVFTQNLAFLVNSTNTVARLQSFKLPVYVETFSNEFVSQAWDYYSDPSVEINSFVVGAKVNGIITDFPKTAVRYTKNRCLKHAKKAPYISPIPPGKLLKQIPKLDLPPPSPPLPVLNDSNVIEPPLPSVSGKFSISGAAR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04704 717 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 11 709 - -
Mepo3g04704 717 CDD GDPD_SHV3_repeat_1 36 338 - -
Mepo3g04704 717 Gene3D Phosphatidylinositol (PI) phosphodiesterase 35 338 IPR017946 GO:0006629|GO:0008081
Mepo3g04704 717 Gene3D Phosphatidylinositol (PI) phosphodiesterase 354 652 IPR017946 GO:0006629|GO:0008081
Mepo3g04704 717 SUPERFAMILY PLC-like phosphodiesterases 356 651 IPR017946 GO:0006629|GO:0008081
Mepo3g04704 717 SUPERFAMILY PLC-like phosphodiesterases 35 338 IPR017946 GO:0006629|GO:0008081
Mepo3g04704 717 MobiDBLite consensus disorder prediction 694 717 - -
Mepo3g04704 717 ProSiteProfiles GP-PDE domain profile. 36 339 IPR030395 GO:0006629|GO:0008081
Mepo3g04704 717 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 353 652 - -
Mepo3g04704 717 Pfam Glycerophosphoryl diester phosphodiesterase family 362 647 IPR030395 GO:0006629|GO:0008081
Mepo3g04704 717 Pfam Glycerophosphoryl diester phosphodiesterase family 43 332 IPR030395 GO:0006629|GO:0008081
Mepo3g04704 717 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 34 338 - -
Mepo3g04704 717 ProSiteProfiles GP-PDE domain profile. 355 652 IPR030395 GO:0006629|GO:0008081
Mepo3g04704 717 CDD GDPD_SHV3_repeat_2 356 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04704 Mepo-Chr3 58527021 58532105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04704 1 709 Receptor kinase-like Gene Family AT4G26690 55.201 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04704 - - tpra:123914082 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04704 3 58527021 58532105 Mepo3g04704 3 58527021 58532105 ECH