Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04675 ATGAGACTCTTGAATCTCTTCTTTCTATCACACCTTCTATTAATTCCAACAATCGCTTATAACCAACCCTTTGAAGATGGTTTCATCTCTGGTGTTATATCTAACAAAGGTCTTGATTTTGCTAAGGATTTGTTGATAGAGAAAGGTATTGAAACTATTGTTTTTGTTAAGTTACCTAAGATTGAGAATACTGCGTATGTTCCACTTGTTGGAAATGCTAAAGTGACTCTGTCTGATATCATGATTAAGGATGTTCAAGTTAATACTTCGAATATTATGATTGGAGAGAGTGGTATTGTTGTAGTTGTCACTGGTGCTACTGTTGATTTGAGTATGAAGTGGAAGTATACTGTTAGTTCTTGGTTGCTTCCTTTTGGGATTTCTGATAGTGGGACTGCTTCAATTAAGGTTACAGGAATGCAAGTAGGGCTTACATTAAATTTAAAGAGCAAAGAAGGAACTCTTAAGTTGAGTCTCTTAGATCATGGATGCTATGTGGGAGATTTATCCATAAAGTTGGATGGTGGAGCAGCTTGGCTTTACCAATTGCTAGTAGATGCTTTTCAAGATATTATAGCATCTTCAGTAGAAGAAGCCATTTCAGATAAAATAACAGAAGGGATAGTAAAGCTTGATAATATTTTGCAAGCTCTTCCAAAGCAAATATCACTAGATAAAACTGTTTCACTAAATGTTTCGTTTGTTGGCAATCCTGTGTTGAGTAATTCCTCAATTGCAATTGCAATTAACGGTTTATTCGCAAGGACAAGTGAAGTTTTTGTACCTCAAAGTTACAAGAACGGATTCAAGGTTTCTTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATACATGAAGATGTGTTCAAATCTGCTTCCCTAGTTTACTTCAATGCAGGTAAAATGCAAATGATTGTTGATGAACTACATGATCAGGCCCTTCTGAACACCGCGGGATGGAGATTCATAGTTCCACAGTTATACAAGCGATATCCAAACGACGACATGCAGATTAATATCTCTGCATCATCTCCACCAGTTATACAAGTGACATACCAAGATATTGGTGCTACTCTTTCTGTAGATATAACAATTGATGTTCTAGAAGGAGGTGAAGTCATACCTGTTGCATGCATCTCAGTGGATGTTAGTGCTTCATGTGCTGTTGAAATTTTAGGAAACAATCTTTCTGGTAGCCTTAGATTACAACAATTTTCTGCATACTTGAAATGGAGCAAAATAGGAAAACTGCACATACGTCTTATTCAGTCGCTGATATCAAGTGTACTCAAAACAGCTGTCCTACCATACTTGAACCACCAATTAAAGAGTCTCCCCTTGCCAAATGTTGATGGTTATGGATTTCAGAATACTGTTATATTGTACAATTATCCATGGATTTCAGTGTGTAGTGATTTTTCCTTTACAGAAGATGACTACTATTTTACTCAACACTCAAATTATGTATCATAA 1479 0.3617 MRLLNLFFLSHLLLIPTIAYNQPFEDGFISGVISNKGLDFAKDLLIEKGIETIVFVKLPKIENTAYVPLVGNAKVTLSDIMIKDVQVNTSNIMIGESGIVVVVTGATVDLSMKWKYTVSSWLLPFGISDSGTASIKVTGMQVGLTLNLKSKEGTLKLSLLDHGCYVGDLSIKLDGGAAWLYQLLVDAFQDIIASSVEEAISDKITEGIVKLDNILQALPKQISLDKTVSLNVSFVGNPVLSNSSIAIAINGLFARTSEVFVPQSYKNGFKVSSACGGLPKMIKVSIHEDVFKSASLVYFNAGKMQMIVDELHDQALLNTAGWRFIVPQLYKRYPNDDMQINISASSPPVIQVTYQDIGATLSVDITIDVLEGGEVIPVACISVDVSASCAVEILGNNLSGSLRLQQFSAYLKWSKIGKLHIRLIQSLISSVLKTAVLPYLNHQLKSLPLPNVDGYGFQNTVILYNYPWISVCSDFSFTEDDYYFTQHSNYVS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04675 492 PIRSF Lipid_binding_protein 3 481 IPR030675 GO:0005615|GO:0008289
Mepo3g04675 492 Pfam LBP / BPI / CETP family, C-terminal domain 277 462 IPR001124 GO:0008289
Mepo3g04675 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Mepo3g04675 492 SMART bpi1_3 33 258 IPR017942 GO:0008289
Mepo3g04675 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 477 IPR017943 GO:0008289
Mepo3g04675 492 Gene3D - 32 463 - -
Mepo3g04675 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 209 IPR017942 GO:0008289
Mepo3g04675 492 SMART bpi2_2 276 471 IPR001124 GO:0008289
Mepo3g04675 492 Gene3D - 36 216 - -
Mepo3g04675 492 PANTHER OS06G0309200 PROTEIN 6 486 IPR045897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04675 Mepo-Chr3 58191065 58196615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04675 K05399 - tpra:123917581 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04675 3 58191065 58196615 Mepo3g04675 3 58191065 58196615 ECH
Mepo3g04675 3 58191065 58196615 Mepo7g02846 7 39378747 39391451 PCT