Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04622 ATGGAGGCGCCGCCGTTAACACAGTCATACGCTCCTACTTCCCTCCTCCTCCGTCACAAAAACCCACTCCCCTTTACCACATTCCCACGCTCTCGCAATCTCAAAAACCCAACAAATTTCTCTATTCGTGCTTCATCTTCTACTTCTAGCGATTCTGTTGTGACTTTGCTTGATTATGGTGCTGGCAATGTTCGGAGTGTTAGGAATGCTATCAAATTCCTTGGATTTGAAATCAAAGATGTTCAAACCCCAGAAGACATTTTGAATGCAAGCCGTTTAGTCTTTCCGGGTGTTGGAGCATTTGCACCTGCTATGGAGGTGTTAAGTAAAACTGGGATGGGCGAAGCACTTTGCTCATATATTGAAAAGGATCGCCCATTTTTAGGAATTTGTCTTGGACTTCAATTGCTTTTTGAATCTAGTGAAGAGAATGGACCAATAAAAGGTCTTGGCTTAATACCTGGAACCGTTGGGAGATTTGATTCATCAAATGGTTTTAGAGTACCGCATATTGGATGGAATGCTTTACAAATCACAAAGGACTCAGAAATTTTGGATGATGTTGGAAACCACCATGTCTATTTTGTCCACTCTTACCGTGCCATGCCTTCAGATGATAACAAAGATTGGGTATCCTCCACTTGTGACTATGGTGATAAATTTATAGCATCTATTAGAAGAGGAAATGTGCATGCGGTTCAGTTCCATCCAGAGAAGAGTGGAGATGTTGGTCTCTCTATTTTGAGAAGATTCTTGTATCCAAAATCAAGCGTGGCAAAGAAGACTGGTGAGGGCAAAGCTTCAAAACTTGCAAAAAGGGTGATTGCTTGTCTCGATGTGAGAGCAAATGATAATGGGGACCTTGTTGTAACCAAAGGAGACCAGTATGATGTAAGAGAAAATACAAAAGAGAATGAGGTTAGGAATCTTGGCAAGCCAGTTGAGCTTGCTCAACAGTACTATAAAGATGGAGCTGATGAGGTCAGCTTTCTAAACATTACTGGATTTCGCGACTTCCCTCTTGGTGATCTACCAATGTTGCAGGTATTGCGATACACATCAGAAAATGTTTTTGTGCCCTTAACCGTTGGGGGTGGAATTAGAGATTTTACAGATTCAAAAGGAAGGCACTATTCTAGTCTGGAAGTAGCCGCAGAATATTTTAGGTCTGGGGCTGACAAGATATCCATTGGAAGTGATGCAGTTTATGCTGCCGAAGAATATTTAAGAACCGGAGTAAAAACAGGGAAGACCAGCTTAGAGCAGATATCAAGAGTTTATGGGAATCAGGCAGTGGTTGTTAGTATTGATCCCCGTAGGGTTTACGTAAACAATCCAAATGATGTGCAATTCCAGACCATAAAGGTTTCAAGTCCAGGTCCTAATGGAGAAGAATATGCCTGGTATCAGTGTACAGTTAATGGGGGGCGAGAAGGTCGGCCAATTGGTGCTTATGAACTGGCGAAAGCTGTTGAAGAACTTGGTGCTGGTGAAATTCTATTAAATTGCATCGATTGTGATGGTCAAGGAAAAGGATTTGATGTAGATTTAATTAAGTTGATCTCAGATGCTGTTAGTATCCCTGTGATTGCAAGTAGTGGTGCTGGCGTTCCTGATCACTTCTCCGATGTGTTTACTAAAACCAATGCATCAGCTGCACTTGCTGCTGGCATTTTTCATAGGAAGGAGGTACCTATTCAGTCAGTGAAAGAACATTTGTTGAATGAAGGCATAGAAGTCCGAATCTGA 1749 0.4191 MEAPPLTQSYAPTSLLLRHKNPLPFTTFPRSRNLKNPTNFSIRASSSTSSDSVVTLLDYGAGNVRSVRNAIKFLGFEIKDVQTPEDILNASRLVFPGVGAFAPAMEVLSKTGMGEALCSYIEKDRPFLGICLGLQLLFESSEENGPIKGLGLIPGTVGRFDSSNGFRVPHIGWNALQITKDSEILDDVGNHHVYFVHSYRAMPSDDNKDWVSSTCDYGDKFIASIRRGNVHAVQFHPEKSGDVGLSILRRFLYPKSSVAKKTGEGKASKLAKRVIACLDVRANDNGDLVVTKGDQYDVRENTKENEVRNLGKPVELAQQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFTDSKGRHYSSLEVAAEYFRSGADKISIGSDAVYAAEEYLRTGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYVNNPNDVQFQTIKVSSPGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDVDLIKLISDAVSIPVIASSGAGVPDHFSDVFTKTNASAALAAGIFHRKEVPIQSVKEHLLNEGIEVRI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04622 582 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 53 261 - -
Mepo3g04622 582 NCBIfam imidazole glycerol phosphate synthase subunit HisH 54 252 IPR010139 GO:0000105|GO:0016763
Mepo3g04622 582 SUPERFAMILY Class I glutamine amidotransferase-like 53 253 IPR029062 -
Mepo3g04622 582 Pfam Histidine biosynthesis protein 273 564 IPR006062 GO:0000105
Mepo3g04622 582 NCBIfam imidazole glycerol phosphate synthase subunit HisF 270 581 IPR004651 GO:0000105|GO:0000107
Mepo3g04622 582 Pfam Glutamine amidotransferase class-I 56 251 IPR017926 -
Mepo3g04622 582 PIRSF IGPS_HisHF 51 582 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
Mepo3g04622 582 SUPERFAMILY Ribulose-phoshate binding barrel 269 581 IPR011060 -
Mepo3g04622 582 FunFam Imidazole glycerol phosphate synthase hisHF 272 582 - -
Mepo3g04622 582 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 53 254 IPR010139 GO:0000105|GO:0016763
Mepo3g04622 582 CDD HisF 272 576 IPR004651 GO:0000105|GO:0000107
Mepo3g04622 582 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 266 582 - -
Mepo3g04622 582 CDD GATase1_IGP_Synthase 56 252 IPR010139 GO:0000105|GO:0016763
Mepo3g04622 582 Gene3D - 49 274 IPR029062 -
Mepo3g04622 582 FunFam Imidazole glycerol phosphate synthase hisHF 49 274 - -
Mepo3g04622 582 Gene3D Aldolase class I 275 582 IPR013785 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04622 K01663 - gmx:100500353 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04622 3 57388364 57396466 Mepo3g04622 3 57388364 57396466 ECH