Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04164 ATGTATATGGCAACTTTGGGTGCAAACTCAAATATTATCTTTGGAAGGTTTCATAAAACAACAACAACAACAACTAGAAAACAACCTACACGATTGTATTTCTTAAGACATCATCGTAATTCTCGCTGTTTGGTATGCCAATGTCAACACCACAAAGGGAAACCAGATTCTTCAAACATCCCACGGATATTAGAAAGTGGGGCGAATAGGATGCTTTTTGTTCTCAAAGATTGGAGAAATTCACGCATAATCCAAGTAGCTGCCATATTGGTTTCCATTTTAATGATTGTTCCATCAGCTGATGCTGTTGATGCACTCAAAACTTGTGCTTGTTTGCTCAAGGAATGCAGGGTAGAATTGGCTAAGTGTCTTGCAAACCCATCATGTGCTGCCAACATTGCTTGTCTCCAAACTTGCAACAATAGACCGGATGAGACTGAATGCCAAATTAAATGTGGGGACGTGTTTGAAAACAAAGTGGTTGATGAATTCAATGAGTGCGCTGTATCGAAGAAGAAATGTGTACCTAAGAAATCTGATGTGGGAGAATTTCCTGTTCCAAACCCGGATGTCCTTGTAAAGAGCTTTAATATTGCAGATTTTAGTGGCAAGTGGTTCATCACTAGTGGCTTAAATCCTACATTCGATGCCTTTGACTGCCAATTACATGAATTTCACACAGAATCAAATAAACTTGTTGGTAATATAACATGGAGGATACCAACTCCAGATGGTGGATTTCTTACACGGTCAGCCGTGCAGAAATTTGATCAAGATCCTTCAAATCCAGGAATCCTCTATAATCATGATAATGAGTACCTTAACTATCAAGATGACTGGTATGTCGTGTCATCTCAAATCGAGAATAAACCAGATGACTATATATTTATATACTACCGAGGCAGAAACGATGCATGGGATGGCTATGGTGGGGCGGTTGTGTACACAAGGAGTAGAGTATTACCTGAATCTATTATTCCTGAACTTGATAGAGCGGCAAAGAGTGTAGGAAGAGACTTTAGCAAGTTCATCAGAACAGATAACACATGTGGACCAGAGCCTTCCATTGTGGAAAGGCTGGAGAAAAAGGTAGAGGAAGGAGAGAAAACCATTGTGAGGGAAGTTGAAGAGTTAGAAGAGGAGGTGGAGAAGGATTTGGAGAAGGTTGGTAAAACAGAAATGACCTTGTTACAAAGGCTGGCAGAAGGGTTTAAAGTGTTTCAAGAAGATGAGGAAAATTTCTTAAGAGGGTTATCAAAAGAAGAAATGGAGATACTGGACAGTCTCAAATTGGAAGCTGAGGAAGTAGAAGAGCTCTTTGGAAATGCCTTGCCGCTAAGGAAACTAAGATAA 1353 0.3991 MYMATLGANSNIIFGRFHKTTTTTTRKQPTRLYFLRHHRNSRCLVCQCQHHKGKPDSSNIPRILESGANRMLFVLKDWRNSRIIQVAAILVSILMIVPSADAVDALKTCACLLKECRVELAKCLANPSCAANIACLQTCNNRPDETECQIKCGDVFENKVVDEFNECAVSKKKCVPKKSDVGEFPVPNPDVLVKSFNIADFSGKWFITSGLNPTFDAFDCQLHEFHTESNKLVGNITWRIPTPDGGFLTRSAVQKFDQDPSNPGILYNHDNEYLNYQDDWYVVSSQIENKPDDYIFIYYRGRNDAWDGYGGAVVYTRSRVLPESIIPELDRAAKSVGRDFSKFIRTDNTCGPEPSIVERLEKKVEEGEKTIVREVEELEEEVEKDLEKVGKTEMTLLQRLAEGFKVFQEDEENFLRGLSKEEMEILDSLKLEAEEVEELFGNALPLRKLR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04164 450 Coils Coil 448 450 - -
Mepo3g04164 450 CDD lipocalin_VDE 180 354 - -
Mepo3g04164 450 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 62 439 IPR044682 GO:0010028|GO:0046422
Mepo3g04164 450 SUPERFAMILY Lipocalins 185 354 IPR012674 -
Mepo3g04164 450 Coils Coil 419 439 - -
Mepo3g04164 450 Coils Coil 357 395 - -
Mepo3g04164 450 ProSitePatterns Lipocalin signature. 197 208 IPR022272 -
Mepo3g04164 450 Pfam VDE lipocalin domain 108 348 IPR010788 GO:0046422
Mepo3g04164 450 Gene3D - 179 361 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04164 K09839 - gmx:100816085 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04164 3 50771154 50774891 Mepo3g04164 3 50771154 50774891 ECH