Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03897 ATGATAGTAGAAAGTGAGTATAACGAAGTAGAAGTTAGATTGGAAAAAGTGTGTGTATACCGACAATTGAGTATGAGTTTTGGCGGTGTGGCATTCTCTTCACTTGTTCTATTGATATGGATATGTATGGTCTCTTCTTCTTCTTCTTTTTCTTTAGCTTTGAGTAGTGGATGCAGTAAACCAGCAGCTTTATTCGTGTTCGGTGATTCAAACTCGGATACGGGTGGACTCGTTTCAGGACTCGGTTTCCCTGTCAATCTTCCAAATGGTCGCACTTTCTTTCACAGATCCACTGGTCGTTTGTCTGATGGACGCCTCGTTATCGACTTTCTCTGCCAAAGTTTGAATACAAGATTTTTGACCCCATACTTGGACTCCATGTCTGGATCCACATTCACAAATGGAGCAAACTTTGCAGTGGTTGGATCCTCTACCCTCCCAAAATATCTTCCTTTCTCTTTAAATATACAGGTCATGCAATTCCAACATTTCAAAGCTCGTAGCCTTCAGCTTGCTACGTCAGGTGCAAAAAATATGATCAACGACCAAGGTTTCCGGGATGCACTATACTTGATTGATATTGGGCAAAATGACCTTGCTGATTCATTTACCAAAAATCTATCATATGTGCAAGTCATCAAGAGGATCCCAACAGTTATCACTGAAATTGAGAATGCTGTTAAGAGTTTGTATAATGAAGGTGGCAGGAAATTTTGGGTTCACAATACTGGGCCCTTTGGCTGTCTTCCTAAATTAATTGCACTGTCTCAGAAGAAGGATCTGGATTCATTTGGATGTCTTTCTAGTTACAATTCTGCTGCAAGATTGTTTAACGAAGCACTGTATCATTCGAGTCAGAAATTAAGAACTGAATTGAAGGATGCTACCTTAGTCTATGTTGATATTTATGCCATTAAGAATGACCTTATCACAAATGCCACCAAATATGGTTTCACAAATCCGCTGATGGTATGCTGCGGCTATGGAGGGCCACCTTATAATTTCGATGTAAGAGTGACATGCGGTCAACCTGGTTATCAAGTTTGTGATGAAGGATCATGGTATGTTAGTTGGGATGGAATCCATTATACCGAGGCTGCAAATACATGGATAGCTTCAAAGATACTTTCGACAGCTTATTCCACGCCGCACATACCTTTTGGTTTCTTCTGTCACTGA 1179 0.4046 MIVESEYNEVEVRLEKVCVYRQLSMSFGGVAFSSLVLLIWICMVSSSSSFSLALSSGCSKPAALFVFGDSNSDTGGLVSGLGFPVNLPNGRTFFHRSTGRLSDGRLVIDFLCQSLNTRFLTPYLDSMSGSTFTNGANFAVVGSSTLPKYLPFSLNIQVMQFQHFKARSLQLATSGAKNMINDQGFRDALYLIDIGQNDLADSFTKNLSYVQVIKRIPTVITEIENAVKSLYNEGGRKFWVHNTGPFGCLPKLIALSQKKDLDSFGCLSSYNSAARLFNEALYHSSQKLRTELKDATLVYVDIYAIKNDLITNATKYGFTNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGSWYVSWDGIHYTEAANTWIASKILSTAYSTPHIPFGFFCH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03897 392 FunFam GDSL esterase/lipase At1g09390 52 380 - -
Mepo3g03897 392 Pfam GDSL-like Lipase/Acylhydrolase 64 375 IPR001087 GO:0016788
Mepo3g03897 392 CDD SGNH_plant_lipase_like 63 377 IPR035669 -
Mepo3g03897 392 Gene3D SGNH hydrolase 58 382 IPR036514 -
Mepo3g03897 392 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 42 379 - -
Mepo3g03897 392 SUPERFAMILY SGNH hydrolase 64 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03897 Mepo-Chr3 48437978 48442339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03897 63 375 Acyl Lipid Metabolism Gene Families AT4G10950 27.660 3.31e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03897 - - gmx:100797617 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03897 3 48437978 48442339 Mepo3g03897 3 48437978 48442339 ECH
Mepo3g03897 3 48437978 48442339 Mepo4g03367 4 43201256 43216854 PCT