Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03893 ATGAACATAGCTTCAGACCCATCAACAATGTCCAAAGTTACTACAACTTTTCAGAAAGCATCCCAAAATGGTTTGAACTTAGCAAGAACATGGGCCTTCAATGATGGAGGTTATAAAGCCCTTCAAATTTCACCCGGTTCTTATGATGAGAATGTATTCAGGGGATTGGATTTTGTGATATCAGAAGCAGGGAAAAATAGAGTGCAATTGATATTAAGTTTGGTGAATAATTGGAATGATTATGGTGGAAAAAGTCAATATGTCAAATGGGCGAAAGAACGTGGCCAGAATGTGAACAATGATGATGATTTCTTCATACATCCCATTGTTAAACAATATTATAAAAACCATGTCAGGGCTATTTTGACGAGAAATAATAGTATTACTGGATTGGCATATAAGGATGACCCGACCATTTTTGCATGGGAGCTTATGAATGAACCTCGTTCTCAAAGTGACTCTTCCGGCAAATCATTACAGGATTGGGTGAGTGAAATGGCTGCTTATGTGAAGTCTATTGATAGCAACCATTTACTAGAAGTTGGTCTTGAAGGATTTTACGGTGAATCAATGCCGGAAAAGAATCCCGGATATGGAGTCGGAACTGATTTCCTTTCCAATAACCAAGTTCCTGAAATTGATTTCGCCACCATTCATCTCTACCCTGAATCATGGGTATCAAGCTCAGACGAAGCTGCCCAAAATGCATTTGTTGACAAGTGGGTTCAAACTCATATTCAAGACTCAAAGGACATTTTAAATAAGCCAATTCTTATTACCGAGTTTGGAAAGTCATCAAAATATTCTGGATATAACGTGGAAAAGAGGAACAGTTACTTTGAAAAGCTATTCAATTTCGTATATGATAGTGCTAGTAATGGAGGAGCATGTGCTGGTGGCCTTTTCTGGCAATTCATGGCTCAAGGATTGGATAACTTCCGTGATGGATATGAAGTCATACTTGAGGAGAACCCTTCAACTGCTGTTGTTATTAGTCAACAATCTAAGAGATTGTCAAATCTCAAATAG 1029 0.381 MNIASDPSTMSKVTTTFQKASQNGLNLARTWAFNDGGYKALQISPGSYDENVFRGLDFVISEAGKNRVQLILSLVNNWNDYGGKSQYVKWAKERGQNVNNDDDFFIHPIVKQYYKNHVRAILTRNNSITGLAYKDDPTIFAWELMNEPRSQSDSSGKSLQDWVSEMAAYVKSIDSNHLLEVGLEGFYGESMPEKNPGYGVGTDFLSNNQVPEIDFATIHLYPESWVSSSDEAAQNAFVDKWVQTHIQDSKDILNKPILITEFGKSSKYSGYNVEKRNSYFEKLFNFVYDSASNGGACAGGLFWQFMAQGLDNFRDGYEVILEENPSTAVVISQQSKRLSNLK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03893 342 Pfam Cellulase (glycosyl hydrolase family 5) 12 279 IPR001547 GO:0004553|GO:0071704
Mepo3g03893 342 Gene3D Glycosidases 1 342 - -
Mepo3g03893 342 FunFam Mannan endo-1,4-beta-mannosidase 6 1 342 - -
Mepo3g03893 342 PANTHER - 1 341 IPR045053 GO:0004553
Mepo3g03893 342 SUPERFAMILY (Trans)glycosidases 6 331 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03893 Mepo-Chr3 48418776 48421470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03893 1 342 Glycoside Hydrolase AT1G02310 55.114 1.97e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03893 K19355 - gmx:100791612 573.163