Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03863 ATGAAAATGGCTCAAACAATTCTGCCCCTGATCGGTGAAGCTGAAACCGATGAGCAGCTTAATGGGCTTAAGCTTAATTCTCATATTCTTCAGGAGTCAATTGCAAAACAGATTAACGAAAACCCAGGGGCTGGATGGGAGGCTGCTATTAATCCTCGTTTCTCCAATTTTACAGTTGGACAATTTAAGCGCCTTCTTGGAGTCAAACAAGCACCTAAAAAAGAACTGTTAAGTACACCTGTTAATATATCCCTCTCTGTTAACGACCTTCTTGCATGCTGTGGATTTCTTTGTGGGGCTGGCTGTGATGGGGGGACTCCCATTTATGCATGGCGGTACTTAGCTCACCATGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATCAAATTGGATGTTCTCACCCTGGTTGTGAGCCAGCATATCAAACACCCAAGTGCGTTAGGAAGTGTGTAAAAGGAAACCAGATTTGGAAGAGGTCAAAGCACTATAGTGTCAAAGCATATAGGGTAAAGTCTGATCCCCAAGATATAATGGCAGAAGTTTATAAGAATGGGCCTGTTGAAGTTGCATTCACTGTTTTTGAGGATTTCGCTCACTACAAATCAGGAGTTTACAAACACATCACTGGTTCTGCACTAGGCGGTCATGCAGTAAAGTTGATTGGGTGGGGAACAAGTGATGAAGGGGAGGACTATTGGCTTCTTGCAAATCAGTGGAATACAAATTGGGGAGAGGATGGTTACTTCAAGATTAAGAGAGGGACAAACGAATGTGGAATTGAAGATGATGTTACCGCGGGTTTACCTTCTACCAAAAATATTATTGGTGAGGCGGAGACATACGAGCTTAGTGAAGTCAAGCTTGATTCTCATATCCTTCAGGAGTCTGTTGTTAAACAGATTAACGAAAACCCAGGGGCTGGATGGGAAGCTACTATTAATCCTCGTTTCTCAAATTTCACGGTTGGACAATTTAAGCGGCTTCTTGGAGTCAAACAAACACCCCGAAGTGAACTGAGTAGTGCACCTGTTGTAACTCATCCAAAATCATTAAAATTGCCAAAGGACTTTGATGCAAGGACAGCTTGGTCGCAATGTAGCACCATTGGGAGAATTCTAGATCAAGGTCACTGTGGTTCTTGTTGGGCATTTGGTGCTGTTGAATCATTATCAGATCGGTTTTGCATTCATTTTGACATGAATGTATCCCTCTCTGTTAATGACATTCTTGCATGCTGTGGCCTTCTTTGTGGGGCTGGCTGTGCTGGGGGGACTCCCTTTTCTGCATGGATATACTTAGCTCACCATGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATCAAATTGGTTGTTCTCATCCTGGCTGTGAGCCAACATACCGAACTCCAAAGTGTGTTAGAAAGTGTGTAAATGGGAACCAGCTTTGGGAGACTTCAAAGCACTATAGTGTCAAAGCATATACTGTCAGATCTGATCCCCAAGATATCATGGCAGAAGTTTATAAGAACGGGCCAGTTGAAGTTGCATTCACTGTTTATGAGGATTTTGCTCATTACAAATCAGGAGTTTACAAACACATCACGGGTTTTGCATTAGGTGGTCATGCAGTAAAGCTGATTGGGTGGGGAACAAGTGATGAAGGGGAGGACTATTGGCTTCTTGCAAATCAGTGGAATACAAATTGGGGGGATGATGGTTACTTCAAGATCAAGAGAGGGACAAATGAATGTGGGATTGAAAATGCTGTTACTGCTGGGTTGCCTTCTACTAAAAATATTGTGAGAGAGGTGACTGACATGGATGTTGATGCTGATGTTTCATTCTGA 1833 0.4299 MKMAQTILPLIGEAETDEQLNGLKLNSHILQESIAKQINENPGAGWEAAINPRFSNFTVGQFKRLLGVKQAPKKELLSTPVNISLSVNDLLACCGFLCGAGCDGGTPIYAWRYLAHHGVVTEECDPYFDQIGCSHPGCEPAYQTPKCVRKCVKGNQIWKRSKHYSVKAYRVKSDPQDIMAEVYKNGPVEVAFTVFEDFAHYKSGVYKHITGSALGGHAVKLIGWGTSDEGEDYWLLANQWNTNWGEDGYFKIKRGTNECGIEDDVTAGLPSTKNIIGEAETYELSEVKLDSHILQESVVKQINENPGAGWEATINPRFSNFTVGQFKRLLGVKQTPRSELSSAPVVTHPKSLKLPKDFDARTAWSQCSTIGRILDQGHCGSCWAFGAVESLSDRFCIHFDMNVSLSVNDILACCGLLCGAGCAGGTPFSAWIYLAHHGVVTEECDPYFDQIGCSHPGCEPTYRTPKCVRKCVNGNQLWETSKHYSVKAYTVRSDPQDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGFALGGHAVKLIGWGTSDEGEDYWLLANQWNTNWGDDGYFKIKRGTNECGIENAVTAGLPSTKNIVREVTDMDVDADVSF 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03863 610 FunFam cathepsin B-like protease 2 77 275 - -
Mepo3g03863 610 Gene3D Cysteine proteinases 283 596 - -
Mepo3g03863 610 Gene3D Cysteine proteinases 76 278 - -
Mepo3g03863 610 Pfam Papain family cysteine protease 81 267 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 Pfam Papain family cysteine protease 354 587 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 300 582 IPR013128 GO:0008234
Mepo3g03863 610 SMART pept_c1 354 589 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 SMART pept_c1 71 269 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 CDD Peptidase_C1A_CathepsinB 80 268 - -
Mepo3g03863 610 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 215 225 IPR025660 -
Mepo3g03863 610 CDD Peptidase_C1A_CathepsinB 355 588 - -
Mepo3g03863 610 SUPERFAMILY Cysteine proteinases 35 270 IPR038765 -
Mepo3g03863 610 FunFam cathepsin B-like protease 2 287 595 - -
Mepo3g03863 610 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 535 545 IPR025660 -
Mepo3g03863 610 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 376 387 IPR000169 -
Mepo3g03863 610 PRINTS Papain cysteine protease (C1) family signature 376 391 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 PRINTS Papain cysteine protease (C1) family signature 553 559 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 PRINTS Papain cysteine protease (C1) family signature 537 547 IPR000668 GO:0006508|GO:0008234
Mepo3g03863 610 Pfam Peptidase family C1 propeptide 294 336 IPR012599 GO:0004197|GO:0050790
Mepo3g03863 610 Pfam Peptidase family C1 propeptide 30 70 IPR012599 GO:0004197|GO:0050790
Mepo3g03863 610 SUPERFAMILY Cysteine proteinases 295 590 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03863 Mepo-Chr3 48097576 48110823 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03863 K01363 - gmx:100778103 592.808