Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03850 ATGACATTTTCCTTTCTCACCCCCTTATTATTTTGCTTTATTGCTCTTTCCTCCTCTGCATCTATTGGAGTTGAATCATTTACTGGCTACCCTATTGCACCAATCTCTTCTCTAATAAGTAAAAATCTTTATGATACAATTTTCCTACACAAAGATGACACTGCATGTCCTGCCAAAAACTTTTACCCTTACCAATCCTTCATTGAAGCTTCCAAATATTTTCCTCAATTTGGTACTACAGGTTGTTTGGCTACAAGAAAGCGTGAGATAGCTGCTTTTCTTGCTCAGATCTCACATGAAACTACTGGTGGGTGGGCCACTGCACCTGATGGACCATTTTCTTGGGGATTATGCTTCAAAGAGGAAATTAGTCCTCAAAGTAACTACTGTGATTCTACTGACAAAGATTGGCCTTGCTTTGAAGGCAAAAGCTACAAAGGAAGAGGTCCTATTCAACTATCTTGGAATTATAACTATGGACCAGCAGGGAAGGCCTTAGGATTTGATGGGCTGAGGAATCCAGAGATTGTATCAAACAATTCAGTGATTGCTTTCAAAACTGCTCTATGGTTTTGGATGACAGAGAGAAAACCAATACCTTCTTGTCACAATGTGATGGTTGGAAAATATTTGGCAACAAAAGCTGACATAGCAGCTAATCGTACAGCTGGTTTTGGATTGGTAACAAATATAGTCAATGGTGGATTGGAATGTGGAATTCCTGATGATGCAAGAGTGAATGATCGAATTGGATTTTTTCAAAGATATACTAAGTTGTTCAATGTGGATACTGGACCTAATTTGGATTGTGCATATCAGAAATCTTTTTAA 831 0.3827 MTFSFLTPLLFCFIALSSSASIGVESFTGYPIAPISSLISKNLYDTIFLHKDDTACPAKNFYPYQSFIEASKYFPQFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFSWGLCFKEEISPQSNYCDSTDKDWPCFEGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVSNNSVIAFKTALWFWMTERKPIPSCHNVMVGKYLATKADIAANRTAGFGLVTNIVNGGLECGIPDDARVNDRIGFFQRYTKLFNVDTGPNLDCAYQKSF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03850 276 Gene3D Endochitinase, domain 2 121 179 - -
Mepo3g03850 276 ProSitePatterns Chitinases family 19 signature 2. 183 193 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mepo3g03850 276 SUPERFAMILY Lysozyme-like 35 276 IPR023346 -
Mepo3g03850 276 PANTHER CHITINASE-RELATED 34 274 - -
Mepo3g03850 276 Gene3D - 42 276 - -
Mepo3g03850 276 Pfam Chitinase class I 38 270 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mepo3g03850 276 FunFam Endochitinase (Chitinase) 121 179 - -
Mepo3g03850 276 CDD chitinase_GH19 39 270 - -
Mepo3g03850 276 PIRSF Endochitinase 12 276 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03850 Mepo-Chr3 47974799 47976482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03850 11 276 Glycoside Hydrolase AT4G01700 70.301 1.02e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03850 - - gmx:100784196 484.952