Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g03845 | ATGTCGAATAACCCAACACAACCTAATGTTGGGTTCATCCCTTCAAACCCAGAACAAAAACAGACTCCTATTCCAATTCACCCCCCTCCTCCTCCTCCTCCTTCAACTAGTATTTTAGCACCACCACCTAGATTTCCTCCACCAATATTACATTTACAGAAAGATCAAACTTCATCTGCCAATGGCAGTCCGGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTCTTTACATCACCTGTCCGTCCAGCTGCCATTCCTTTTCGAACTTCACCCGCTTCGCCTCAGCCGCCTGCTCGTTCCTCAGCCTCTTCTTTGCCAACCTCGTCGCCACCACGTTACTCAAATGGATCGTTTGACTTACAGTCACAAGTGTCTGGTGGCTTAGAGGATCATATTCCAAATGGAGAATCATCCGTTGTACTTTTCTCAGCTCATAAGGTATTGAAGCAGAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCACTGGTCTCTCCTGGTAGGGAGGTCTCGACTGGCCCCCAGGTAATACAGCGTGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATATATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATATGTCGAAAACTGAATGCAAGTGATGGTGAGTACATTGCACATAGCAAAGAAGATCTTCACAGATTTCCAGAACTATCTTCACCAATGGTTGACTATGTTCAAACTGGGACCAAGCGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTCTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATATTATATGGCCGTACCGTGTCGGTGTACGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTTGTGGGAACAAGTCGCCAAGTGAAGATTCTTTGAAGGCTTTGCTTTATGGTACCGGTATATATTTGTCACCAATGCATGCTTCACTGGCTGTAGCGCATTCCATATTTTCATCATTGACGCCGTATAAGTTGAACGTACCAGAAACTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTACGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGTCGTGAGGCTCATCGACACAATATATTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTAAATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCGTCTGCCAGATCGGCAGGCTCTCATGGATTGTTAGAATTGCGCACATCAGATGATATTCTCATCACTCAAGTTGTGGGTCCGGGGGAAGAGTCACATGTAGACACCCATGAAACATTTAAAAACGACGCCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACGCAGAGCTTCGCTCTCTCTATGGAAACTAAAGGAGACATCAAAAGCGATTTTGTGTTTTTTCAGTTTGCAATTCAGTATTCAAATGTGTATCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGATTGCCAACAGTAGACAGTGTTTCGGGATATCTTGAAAGTGTTCAGGATGAAGTGGCTGCTGTCCTCATTGCAAAGAGAACTCTGTTACGAGCCAAGAACCATTCAGTTGCTGTTGATATGCGGGCAACAATAGATGAAAGAATCAAGGATATTGGTCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCATTGCTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGTCATGAAGATGAGAGGTCCGTGCTGAGGAACCTATTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCCATGCAGTCTGATACTGCTGTTGTACTTGACCATGGAACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCAATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCTCTCGTCTCATACCAGCTCACAAGGACCCTCCTTATGAGCAGGAGGCAAGGTTCCCACAACTTAGGACATTAACATCAGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGCGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCGAGTTGA | 2589 | 0.45 | MSNNPTQPNVGFIPSNPEQKQTPIPIHPPPPPPPSTSILAPPPRFPPPILHLQKDQTSSANGSPVPHLSTPPGPPVFTSPVRPAAIPFRTSPASPQPPARSSASSLPTSSPPRYSNGSFDLQSQVSGGLEDHIPNGESSVVLFSAHKVLKQKKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDYVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLCGNKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPETSRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILNPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDAALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRATIDERIKDIGLKFGSQLPKSKLHCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVANEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS | 862 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g03845 | 862 | Gene3D | von Willebrand factor, type A domain | 263 | 508 | IPR036465 | - | |
| Mepo3g03845 | 862 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 16 | 611 | - | - | |
| Mepo3g03845 | 862 | SUPERFAMILY | Zn-finger domain of Sec23/24 | 173 | 245 | IPR036174 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mepo3g03845 | 862 | Gene3D | Severin | 729 | 826 | IPR029006 | - | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mepo3g03845 | 862 | CDD | gelsolin_like | 715 | 806 | - | - | |
| Mepo3g03845 | 862 | Pfam | Sec23/Sec24 zinc finger | 183 | 221 | IPR006895 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mepo3g03845 | 862 | SUPERFAMILY | Helical domain of Sec23/24 | 613 | 713 | IPR036175 | GO:0006886|GO:0006888|GO:0030127 | |
| Mepo3g03845 | 862 | CDD | trunk_domain | 257 | 500 | - | - | |
| Mepo3g03845 | 862 | Pfam | Sec23/Sec24 helical domain | 614 | 710 | IPR006900 | GO:0006886|GO:0006888|GO:0030127 | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 95 | 129 | - | - | |
| Mepo3g03845 | 862 | FunFam | Protein transport protein SEC23 | 174 | 236 | - | - | |
| Mepo3g03845 | 862 | SUPERFAMILY | vWA-like | 264 | 496 | IPR036465 | - | |
| Mepo3g03845 | 862 | Gene3D | Sec23/Sec24 helical domain | 602 | 721 | - | - | |
| Mepo3g03845 | 862 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC23 | 146 | 859 | IPR037364 | - | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 21 | 49 | - | - | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 1 | 132 | - | - | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 67 | 81 | - | - | |
| Mepo3g03845 | 862 | Gene3D | - | 173 | 236 | - | - | |
| Mepo3g03845 | 862 | Pfam | Sec23/Sec24 beta-sandwich domain | 509 | 600 | IPR012990 | - | |
| Mepo3g03845 | 862 | SUPERFAMILY | C-terminal, gelsolin-like domain of Sec23/24 | 715 | 855 | IPR036180 | - | |
| Mepo3g03845 | 862 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
| Mepo3g03845 | 862 | Pfam | Sec23/Sec24 trunk domain | 265 | 491 | IPR006896 | GO:0006886|GO:0006888|GO:0030127 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g03845 | - | - | gmx:100781518 | 1495.72 |