Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03824 ATGTCAAAACAAAGGTTGGAGGGTAAGGTTGCTATAGTGACAGGGGGAGCAAGCGGAATAGGTGCAGAGACAGTAAAGACATTTGTGGAAAATGGAGCATTCGTTGTTATGGCAGATATCAATGATGAATTGGGTCAGCAAGTTGCAACTTCAATTGGGTTGGACAAAGTGAGTTACCACCATTGTGATGTGAGAGATGAAAAACAAGTTGAGGAAACCGTAGCTTTCGCATTGGAAAAATATGGAACCTTAGACATTATGTTTAGCAACGCTGGAATTGTAGGTGGTATGTCTAGCAGCATACTAAAATTTGATGTAGATGAATTTGACAACACTATGGCTATTAATGTCCGTGGATCAGCTACAACTATCAAGTACGCTGCACGCGTTATGCTGGAAAGAAAAATTCGTGGATCCATAATTTGCACGGCCAGTGTGGCGGGCTTTAGTGCTGGATGTGCTGGACATGATTATACAACATCCAAACATGGTCTTATAGGCCTTGTTCGCTCAACGTGCAGTGAGCTTGGAGCTTATGGAATCACCTTCGTGTTGCCACACCTCTTGTATTTAGAACACTGA 582 0.4261 MSKQRLEGKVAIVTGGASGIGAETVKTFVENGAFVVMADINDELGQQVATSIGLDKVSYHHCDVRDEKQVEETVAFALEKYGTLDIMFSNAGIVGGMSSSILKFDVDEFDNTMAINVRGSATTIKYAARVMLERKIRGSIICTASVAGFSAGCAGHDYTTSKHGLIGLVRSTCSELGAYGITFVLPHLLYLEH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03824 193 PRINTS Glucose/ribitol dehydrogenase family signature 158 177 IPR002347 -
Mepo3g03824 193 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Mepo3g03824 193 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Mepo3g03824 193 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Mepo3g03824 193 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2 182 - -
Mepo3g03824 193 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 145 173 IPR020904 GO:0016491
Mepo3g03824 193 FunFam Short-chain dehydrogenase reductase 1 188 - -
Mepo3g03824 193 Pfam short chain dehydrogenase 9 183 IPR002347 -
Mepo3g03824 193 Gene3D - 1 191 - -
Mepo3g03824 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 IPR002347 -
Mepo3g03824 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Mepo3g03824 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Mepo3g03824 193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 185 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03824 Mepo-Chr3 47724451 47725165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03824 6 181 Acyl Lipid Metabolism Gene Families AT1G62610 31.522 7.42e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03824 - - tpra:123891074 294.278