Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03812 ATGGCTTTGATTGCAAAACCGAACGTGTTCAACGGTTTGAGTTTTCATCTCAAAGAAACTCAAATTCCTTTTTCGAGTTTCAGCGTCATTCGCAAGCGTTTCGGAGATTCTCCCCATCGCAATGTGGTCCTAAGAAGCAACGGAAATGCTTCGATTCTTCCCAAAATCAGAGCTCAAAACCTTCCTGACTATGTTCCTGAATCCAAGTTTTACAAAGTTGAAGCCATTCTCAGGCCATGGAGAATCCCTCAGGTTTCTTCGGGTTTGTTGAAAATGGGAATTCGTGGTGTCACTGTATCTGATGTCAAGGGGTTTGGTGCTCAGGGTGGCTCAAAAGAGAGGCAGGGAGGTTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATTGTGGTGAGAAAAGACCAGGTTGAGGCAGTGATAAACAAAATTATGGAGACGGCAAGAACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCTGTATCTGATGTAATAAGAATCCGCACAGGTGAGCGTGGGGAGCAGGCTGAGAGGATGGCTGGGGGACTAACTGATGCGTCGTATGATTGA 585 0.4444 MALIAKPNVFNGLSFHLKETQIPFSSFSVIRKRFGDSPHRNVVLRSNGNASILPKIRAQNLPDYVPESKFYKVEAILRPWRIPQVSSGLLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVINKIMETARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMAGGLTDASYD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03812 194 ProSitePatterns P-II protein C-terminal region signature. 153 166 IPR017918 GO:0006808|GO:0030234
Mepo3g03812 194 PANTHER NITROGEN REGULATORY PROTEIN P-II 37 191 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 ProSiteProfiles P-II protein family profile. 70 182 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 Gene3D - 59 192 IPR015867 -
Mepo3g03812 194 Pfam Nitrogen regulatory protein P-II 71 178 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 PRINTS P-II protein signature 122 145 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 PRINTS P-II protein signature 153 173 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 PRINTS P-II protein signature 92 110 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 PRINTS P-II protein signature 71 86 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 SMART P_II_3 73 175 IPR002187 GO:0006808|GO:0030234
Mepo3g03812 194 SUPERFAMILY GlnB-like 72 181 IPR011322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03812 Mepo-Chr3 47598894 47601562 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03812 - - gmx:100499915 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03812 3 47598894 47601562 Mepo3g03812 3 47598894 47601562 ECH