Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03743 ATGGCTTCTGCACCTTCCATGTCAGTTTCTTTGGAGTGTGTGAATGTATGCAGTTCTTGGAGAGGGGATGGAAATGGAAAATATGATTGTAATCATCTATCATGTGCGTCGAAATCTCCTAGAGTTCTTACCGGCTTTCTTGCGAGCACGGCTCATCCTCATCAATATTTTTGGTTGAATGGAAGAAGGAACCAGTTTAATTTTGCATGTGAAGCTTTTAGTATAGTAGGTTCATATTCCGACAAAGCACTTGGCGTCACACTTCACGAGGGATTCTCTGAATCTATCTTTTCTAGATTTGCATCTAGAGAATGGCAGTTGTCTTGTTCTTCGGTTTTTTCCTCGGATGTTGCCAGCGAGTTTTCCCCTGGAAGTTTGTGGGAGGATCTTAGGCCCGTGATCTCGTATCTTCCTCCTAAAGAACTGGAGTTAGTCCGTAATGCTTTTACGTTGGCATTTAAAGCTCACGATGGTCAGAAAAGACGCAGCGGCGAACCCTTCATCATTCATCCGGTTGAGGTTGCACGGATTCTTGGAGAACTTGAACTTGATTGGGAGTCAATTGCTGCTGGATTACTTCATGACACGGTTGAAGATACAGATGTTGTGACTTTTGAGAGGATAGAGGAGGAATTTGGTGCTACAGTGCGCCACATTGTGGAAGGAGAGACTAAGGTGTCAAAGCTGGGGAAGTTGAAGTACAAGAATGAAAATGATTCTGTTCAAGATGTGAAAGCAGAGGACCTTCGGCAAATGTTTCTGGCTATGACAGAGGAGGTTCGTGTTATTATCGTCAAATTAGCAGACAGGTTACATAACATGCGCACTCTTTCACATATGCCTCCACATAAACAGAATAGCATTGCAATGGAGACATTACAGGTATTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATTAAGTCAGAACTAGAAAATCTATCATTTATGTACACAAATCCTGAAGATTATGCAAAGGTGAAGAGAAGAGTTGCCGACCTATTCAAAGAACATGAGAAAGATCTTTTAGAGGCGAACAAAATATTGTTAAAGAAAATCCAAGATGATCAATTCTTAGACCTTATGACAGTTAAAACGGAAGTTCGTGCTGTGTGTAAAGAGCCTTACAGTGTCTATAAAGCTGTGCTCAAATCTAAAAGCTTGATCAATGAGATTAACCAAATTTCACAGCTTCGTATCATTATTAAACCAAAGCCGTGCGTTGGGGTTGGGCCTTTATGCAGTCCACAGCTGATTTGCTATCATGTTCTGGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTGTGAAGGATTACATTGCAACCCCTAAACCTAATGGATACAAAAGTCTTCATAGCACTGTGATTCCATTTTTGTATGAGAGTATGTTCAGGCTTGAAATACAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCAGCTCACTATAGTGGGAGAGAATTCGTTACTGGCTTGGTTGGAAGTGCAGTGCCCAGTGGCAAAAGCTCAAGGGGGAAGACAGTGTGTCTTAGCAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCTATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGCTCTAGGGAATTTGTGGACACTGTTACAAGAGATCTTCTGGGCAGTCGTGTCTTTGTATTTACACCCAGTGGAGAGATTAAGAATCTTCCTCAAGGTGCTACAGTAATTGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTAGCCGCAAAGGTCAACGGAAATCTTGTTTCTCCTGCACGCGTGCTTGCAAATGCAGAAGTTGTGGAGATAATCACATATAATGCACTTTCTAGCAAATCCGCTTTTCAAAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGGAGTGCGAGACACAAAATAATGAAGTTTCTGAGGGAGCAAGCTGCACTTTCCGCTGCTGATATCACTACAGAAGCTGTTAATGACTTTGTCGGTGATTCTGACGAGGATAGTGAATCTGAAAAACTGTCAAATGGTTCCAGCAGTTCCAAAGATAAAAGGGGGAAAATATTATTGAACGGTGTGGAAATATCAACTTCAGAACGAAGTGAGACTGTCCTTCAGAGTAAGAATGGAAGTGCTTGGACACCCAAGGTCAATGGAAAACACAATAAGCACGTGCATCATGTAAATTTGAAGGGCAAAGGGGACATGATGCTGCAGGGAAACCATGTCGCCAATATGATTCAAGTTAACAATCCAAAATATAAAGAAGTCCTGCCAGGTTTAGAAAGTTGGCAAGCCCATAAAATTACCTCGTGGCACAATATAGAAGGCCATTCCATCCAATGGTTATCTGTTGTATCCATAGACCGAAGAGGCATGATGGCTGAGGTCGCTACAGCATTGGCCACTTCAGACATAGCCATATGTTCTTGTGTGGCTGAGGTTGATGGCGGAAGGGGAATGGCTGTTATGTTATTTCAAGTTGAAGGAAATTTAGAAAATTTGGTGAGTGCTTGCTCTAGAGTAGATCAAATACCGGGTGTTTTGGGATGGTCTACTGGCTGTAGTTGGCCAAGCCTGATGGAAAACCATGGCGTTCTTGAGTGCTAG 2643 0.4238 MASAPSMSVSLECVNVCSSWRGDGNGKYDCNHLSCASKSPRVLTGFLASTAHPHQYFWLNGRRNQFNFACEAFSIVGSYSDKALGVTLHEGFSESIFSRFASREWQLSCSSVFSSDVASEFSPGSLWEDLRPVISYLPPKELELVRNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADLFKEHEKDLLEANKILLKKIQDDQFLDLMTVKTEVRAVCKEPYSVYKAVLKSKSLINEINQISQLRIIIKPKPCVGVGPLCSPQLICYHVLGLIHGIWTPIPRSVKDYIATPKPNGYKSLHSTVIPFLYESMFRLEIQIRTEEMDLIAERGIAAHYSGREFVTGLVGSAVPSGKSSRGKTVCLSNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPSGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAALSAADITTEAVNDFVGDSDEDSESEKLSNGSSSSKDKRGKILLNGVEISTSERSETVLQSKNGSAWTPKVNGKHNKHVHHVNLKGKGDMMLQGNHVANMIQVNNPKYKEVLPGLESWQAHKITSWHNIEGHSIQWLSVVSIDRRGMMAEVATALATSDIAICSCVAEVDGGRGMAVMLFQVEGNLENLVSACSRVDQIPGVLGWSTGCSWPSLMENHGVLEC 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03743 880 CDD TGS_RSH 562 620 IPR033655 -
Mepo3g03743 880 Pfam HD domain 148 305 - -
Mepo3g03743 880 CDD NT_Rel-Spo_like 364 484 IPR007685 GO:0015969
Mepo3g03743 880 MobiDBLite consensus disorder prediction 673 696 - -
Mepo3g03743 880 SUPERFAMILY TGS-like 548 620 IPR012676 -
Mepo3g03743 880 ProSiteProfiles TGS domain profile. 557 620 IPR004095 -
Mepo3g03743 880 Pfam TGS domain 561 620 IPR004095 -
Mepo3g03743 880 SUPERFAMILY Nucleotidyltransferase 322 494 IPR043519 -
Mepo3g03743 880 ProSiteProfiles HD domain profile. 167 274 IPR006674 -
Mepo3g03743 880 Gene3D - 554 629 IPR012675 -
Mepo3g03743 880 Gene3D Beta Polymerase, domain 2 322 476 IPR043519 -
Mepo3g03743 880 PANTHER GTP DIPHOSPHOKINASE RSH1, CHLOROPLASTIC-RELATED 7 875 - -
Mepo3g03743 880 Pfam Region found in RelA / SpoT proteins 374 490 IPR007685 GO:0015969
Mepo3g03743 880 SUPERFAMILY HD-domain/PDEase-like 130 320 - -
Mepo3g03743 880 SMART RelA_SpoT_2 374 496 IPR007685 GO:0015969
Mepo3g03743 880 SMART hd_13 163 283 IPR003607 -
Mepo3g03743 880 CDD HDc 165 296 IPR003607 -
Mepo3g03743 880 FunFam GTP pyrophosphokinase RelA 127 321 - -
Mepo3g03743 880 SUPERFAMILY ACT-like 792 860 IPR045865 -
Mepo3g03743 880 Gene3D Hypothetical protein af1432 128 320 - -
Mepo3g03743 880 FunFam GTP pyrophosphokinase (RelA/SpoT) 553 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03743 Mepo-Chr3 46991298 47000326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03743 177 492 EF-hand Containing Proteins AT3G17470 31.288 2.48e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03743 K00951 - gmx:100786637 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03743 3 46991298 47000326 Mepo3g03743 3 46991298 47000326 ECH