Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03713 ATGGAAGCAATTGCAGCCATGGATGTCGAGGAACAACAACCTTTTCCCATACCCAACAACGTTAAACGCTTCGGTCTTAAAAACTCTATCCAAACTAATTTCGGCGACGACTATGTTTTCCAAATCATCCCAAAGGATGATTGGAGTACAATGGCGGTTTCACTTTCAACGAATGCAGTGAAACTGTATTCACCAGTGGTGGGTCAATATTATGGAGAGTGCAAGGGTCACACTGCAACTATCAATCAGATTTTGTTTTCGGGTCATTCTAATCCCAATATTCTAAGCTCTTGTTCTTCGGATGGTACTATCAGGACTTGGGACACAAGAACATTTCACCAGGTTTCTATTATCAATGCTGGTCCATCTCAAGAAATCTTCAGCTTTTCTATTGGAGGACCTAGTGGAAATTTAGTTGCTGCGGGTTGTGATTCACAGGTACTCTTGTGGGATTGGAGAAATAACAAGCAAATTGCATGCCTAGAAGATTCTCATGTGGATGATGTCACTCAGGTTCATTTTATCCCTGATGAACAAGGCAAGCTCATTTCTGCTTCAGTTGATGGATTGATCTGCATATTTGATACCACTGGAGATATTAACGACGATGATCATCTAGAGTCAGTGATTAATGTGGGAACATCAATTGGAAAGGTGGGTTTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACTCATATTGAAACTCTCGGCATCTGGGACTGGAAAGAAGGTAGAAATGAAGTAAACTTCTCAGACACACGTACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTACTTCGTTGATTGCCACTACTCAAGAGAAGCTGAAAAATTATGGTTGATCGGTGGCACAAATGCGGGTACTTTGGGTTTCTTTCCTGTAAATTACAGTGAAACGACAACAATTGGAGGTGCAGAAGCAATTCTCGAAGGTGGCCATACTGATGTTGTTAGAAGTGTTCTACCTATGTCCAGAGTCCATAGTTCAGGCATTTTTGGATGGACAGGCGGGGAAGATGGTAGGCTATGTTGTTGGCTGTCTGATGATGATTCCCCTCAAAAAAACCAATCTTGGATTTCAAGTTCATTGGTTATGAAACCAGAAAGAACTTGCAAGAAAAATCGCCATCACCCCTACTAA 1155 0.4113 MEAIAAMDVEEQQPFPIPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWSTMAVSLSTNAVKLYSPVVGQYYGECKGHTATINQILFSGHSNPNILSSCSSDGTIRTWDTRTFHQVSIINAGPSQEIFSFSIGGPSGNLVAAGCDSQVLLWDWRNNKQIACLEDSHVDDVTQVHFIPDEQGKLISASVDGLICIFDTTGDINDDDHLESVINVGTSIGKVGFFGESYQKLWCLTHIETLGIWDWKEGRNEVNFSDTRTLASESWNLDHVDYFVDCHYSREAEKLWLIGGTNAGTLGFFPVNYSETTTIGGAEAILEGGHTDVVRSVLPMSRVHSSGIFGWTGGEDGRLCCWLSDDDSPQKNQSWISSSLVMKPERTCKKNRHHPY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03713 384 Gene3D - 41 125 IPR015943 GO:0005515
Mepo3g03713 384 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Mepo3g03713 384 PANTHER UNCHARACTERIZED 20 383 IPR039328 -
Mepo3g03713 384 Pfam WD domain, G-beta repeat 71 108 IPR001680 GO:0005515
Mepo3g03713 384 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 74 111 - -
Mepo3g03713 384 ProSiteProfiles Trp-Asp (WD) repeats profile. 74 117 IPR001680 GO:0005515
Mepo3g03713 384 SUPERFAMILY WD40 repeat-like 36 350 IPR036322 GO:0005515
Mepo3g03713 384 SMART WD40_4 67 108 IPR001680 GO:0005515
Mepo3g03713 384 SMART WD40_4 154 195 IPR001680 GO:0005515
Mepo3g03713 384 SMART WD40_4 111 151 IPR001680 GO:0005515
Mepo3g03713 384 Gene3D - 126 379 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03713 K24758 - gmx:100794786 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03713 3 46765225 46770190 Mepo3g03713 3 46765225 46770190 ECH