Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03684 ATGAACAGCTTAACGACGAGCTTCACAGCTCGAATATACGGCACACGCTGCGACGTAGTTCCATTAAGAAACCGTTCCGTTCACCAATTCAATTACAGACGCGTCACAGTTCTACCCACTCTCACTTCTACAAGATTCGTTTGCATGGCGGAACCTTATCTGTTACTGAAGCTTGAATCTGCTGAAAAGACATGGAAAGAATTATCGGTGAAGCTTGCTGATCCAGACATTGTTTCTAATCCCAGTGAGTACCAGAAGCTAGCACAATCAGTATCAGACCTTGACGTGGTTGTGTCCTTGTATCAGAAATTTAAAGACTGTGAGAAGATGCTTGAAGAAACCAAAGCTTTAGCAAAGGATGCTGGCAATGACGAGGATATGGCGGAAATGATATCTTACGAAATTGACTCTTTGTCCATGCAACTCTCAGAGCTAGAGGAAAAACTGAAGGTTTTACTGCTTCCCAGTGATCCTCTGGATGAAAGAAACATAATGCTTGAAGTGAGAGCAGGTACTGGTGGCGACGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAAATTTAGTGAACTTAATTCTTGGAAGCATTCTGCCATCTCATGCTCTGAGGCAGAAAAAGGGGGATACAAAACTTATGTGATGGAGATAAAAGGAAATCGTGTCTACAGTAAATTAAAATATGAATCCGGTGTCCACAGAGTTCAACGTGTTCCTCTAACAGAAACACAAGGCCGCGTACATACTTCGACCGCAACAGTGGCCATTATGCCAGAGGTTGATGAAGTTGAAGTTGTAATTGACCCAAAAGATATTGAAGTGACAACGGCACGTTCTGGGGGTGCTGGAGGCCAGAATGTTAATAAGGTTGAAACAGCAATTGATCTTGTTCATAAACCAACGGGAATACGCATCTTTTGTACTGAACAAAGGACTCAGATTCAGAACAAGAATCTTGCTTTTAAGTTACTGCGAGCCAAACTATATGAGATAAAGGTAAGGGAGCAGCAAGAGTCAATACGAAATCAAAGAAAATCACAGGTCGGTACAGGAGCACGTTCAGAAAAAATTCGGACATACAATTATAAGGACAACAGGGTTACTGACCACAGACTGAAGCAGAACTTTTCTCTCACCTCTTTTCTGGGTGGTAACATAGAGGAGGCTGTTCAGTCTTGTGTTGCAATGGAACAAAAGGAGCTTATGGAAGAACTTGTTGAGTCTATGGGTGCCACTGCCAGATGA 1251 0.4269 MNSLTTSFTARIYGTRCDVVPLRNRSVHQFNYRRVTVLPTLTSTRFVCMAEPYLLLKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSVSDLDVVVSLYQKFKDCEKMLEETKALAKDAGNDEDMAEMISYEIDSLSMQLSELEEKLKVLLLPSDPLDERNIMLEVRAGTGGDEAGIWAGDLVRMYEKFSELNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEVDEVEVVIDPKDIEVTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNQRKSQVGTGARSEKIRTYNYKDNRVTDHRLKQNFSLTSFLGGNIEEAVQSCVAMEQKELMEELVESMGATAR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03684 416 Pfam PCRF domain 62 256 IPR005139 GO:0006415
Mepo3g03684 416 NCBIfam peptide chain release factor 1 50 408 IPR004373 GO:0006415|GO:0016149
Mepo3g03684 416 Coils Coil 128 148 - -
Mepo3g03684 416 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 280 296 IPR000352 GO:0003747|GO:0006415
Mepo3g03684 416 FunFam Peptide chain release factor 1 262 357 - -
Mepo3g03684 416 Gene3D - 48 158 - -
Mepo3g03684 416 FunFam Peptide chain release factor 1 160 270 - -
Mepo3g03684 416 PANTHER LD18447P 49 409 - -
Mepo3g03684 416 SMART PCRF_a_2 116 231 IPR005139 GO:0006415
Mepo3g03684 416 Pfam RF-1 domain 263 373 IPR000352 GO:0003747|GO:0006415
Mepo3g03684 416 FunFam Peptide chain release factor 1 332 411 - -
Mepo3g03684 416 Gene3D - 160 411 - -
Mepo3g03684 416 Gene3D - 264 353 - -
Mepo3g03684 416 SUPERFAMILY Release factor 63 404 IPR045853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03684 Mepo-Chr3 46522834 46530804 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03684 K02835 - gmx:100777225 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03684 3 46522834 46530804 Mepo3g03684 3 46522834 46530804 ECH